RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 MRPS10P82664 201 aaKnown RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 AKR1C1Q04828 323 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 UBE2V2Q15819 145 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 HIST3H3Q16695 136 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM176BQ3YBM2 270 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM71Q6P5X7 295 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 KCTD18Q6PI47 426 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 BRICD5Q6PL45 260 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 GSG1LQ6UXU4 331 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 Q6ZPA2 131 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 LRRC18Q8N456 261 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 SPERTQ8NA61 448 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 OR1M1Q8NGA1 313 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 MAFAQ8NHW3 353 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 TNFAIP8L1Q8WVP5 186 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 HDHD3Q9BSH5 251 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 ADAT1Q9BUB4 502 aaKnown RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 PLA2G2EQ9NZK7 142 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 MRTO4Q9UKD2 239 aaKnown RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 NCOR1O75376 2440 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 OR6C76A6NM76 312 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 HMSDA8MTL9 139 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF736B4DX44 427 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 CDK2AP1O14519 115 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 SYT7O43581 403 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 F10P00742 488 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 HLA-AP01891 365 aaKnown RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 LAP3P28838 519 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 GLT8D1Q68CQ7 371 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 SLC23A3Q6PIS1 610 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 SLC25A47Q6Q0C1 308 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 CPEB2Q7Z5Q1 589 aaKnown RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 C12orf45Q8N5I9 185 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 CHST4Q8NCG5 386 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 FGFBP3Q8TAT2 258 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 PPP1R1CQ8WVI7 109 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 MRPL48Q96GC5 212 aaKnown RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 RNF126Q9BV68 326 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF416Q9BWM5 594 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 MFFQ9GZY8 342 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 SHARPINQ9H0F6 387 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 C5orf66Q9H5L9 145 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 PTTG3PQ9NZH4 202 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 EMC3Q9P0I2 261 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 AKAP7Q9P0M2 348 aaPredicted RBP5.32□□□□□ -1.56
CLCN3-201ENST00000347613 WIF1Q9Y5W5 379 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 SHANK1Q9Y566 2161 aa5.32□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF407Q9C0G0 2248 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 C9orf170A2RU37 121 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 TTLL8A6PVC2 850 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 PHYHO14832 338 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 KLF7O75840 302 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 MELTFP08582 738 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 AKR1C4P17516 323 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 BDKRB2P30411 391 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 APOBEC1P41238 236 aaKnown RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 EMP2P54851 167 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 TAS2R19P59542 299 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SNAI3Q3KNW1 292 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 MRPL14Q6P1L8 145 aaKnown RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 GLIPR1L1Q6UWM5 242 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 UNQ6126/PRO20091Q6UXV3 157 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 FAM57BQ71RH2 274 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 BATF2Q8N1L9 274 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SPEM1Q8N4L4 309 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SAP25Q8TEE9 199 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 CASTOR1Q8WTX7 329 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 DYRK2Q92630 601 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ARHGAP5-AS1Q96IT6 56 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SPEF1Q9Y4P9 236 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 RFPL4AA6NLU0 287 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 RFPL4AL1F8VTS6 287 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 OR2T1O43869 369 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ZIC3O60481 467 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 FGF2P09038 288 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 CALCRP30988 508 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 CASRP41180 1078 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 NPY4RP50391 375 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 NOVA1P51513 510 aaKnown RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SCAND1P57086 179 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ARPC4P59998 168 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 RPS18P62269 152 aaKnown RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 DAZAP2Q15038 168 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 PCOLCEQ15113 449 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 PDCD1Q15116 288 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 TAF13Q15543 124 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 AADACL3Q5VUY0 350 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ABHD12BQ7Z5M8 362 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF546Q86UE3 836 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ZIC4Q8N9L1 334 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 OR5M9Q8NGP3 310 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 OR5M8Q8NGP6 311 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 FBXW5Q969U6 566 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 MARVELD3Q96A59 401 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 NABP1Q96AH0 204 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 ZPBPQ9BS86 351 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 RTBDNQ9BSG5 229 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-201ENST00000347613 MRI1Q9BV20 369 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 SRXN1Q9BYN0 137 aa5.31□□□□□ -1.56
CLCN3-201ENST00000347613 PPP4R1LQ9P1A2 415 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms