RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 WIPI2Q9Y4P8 454 aa16.81■□□□□ 0.28
LINC00654-202ENST00000589201 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC00654-202ENST00000589201 DYSFO75923 2080 aa16.81■□□□□ 0.28
LINC00654-202ENST00000589201 CUBNO60494 3623 aa16.81■□□□□ 0.28
LINC00654-202ENST00000589201 CCDC182A6NF36 153 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 MLNRO43193 412 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 LYNP07948 512 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 TNFRSF1AP19438 455 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 OPRL1P41146 370 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 CX3CR1P49238 355 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 LMO4P61968 165 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 C12orf73Q69YU5 71 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 RHOUQ7L0Q8 258 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 BCDIN3DQ7Z5W3 292 aaKnown RBP16.8■□□□□ 0.28
LINC00654-202ENST00000589201 ZNF454Q8N9F8 522 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 LINC01356Q8N9X3 169 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 RAB1CQ92928 201 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 TIMD4Q96H15 378 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 REPIN1Q9BWE0 567 aaKnown RBP16.8■□□□□ 0.28
LINC00654-202ENST00000589201 PRRG3Q9BZD7 231 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.8■□□□□ 0.28
LINC00654-202ENST00000589201 ENOPH1Q9UHY7 261 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 KLHDC2Q9Y2U9 406 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 TANC2Q9HCD6 1990 aa16.8■□□□□ 0.28
LINC00654-202ENST00000589201 JMJD1CQ15652 2540 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 A0A1B0GWJ7 208 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 CD300LBA8K4G0 201 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 HLA-DPB1P04440 258 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 ANXA2P07355 339 aaKnown RBP16.79■□□□□ 0.28
LINC00654-202ENST00000589201 H2BFMP0C1H6 154 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 CDH15P55291 814 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 SLC3A1Q07837 685 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 SLC16A9Q7RTY1 509 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 SPRYD4Q8WW59 207 aaPredicted RBP16.79■□□□□ 0.28
LINC00654-202ENST00000589201 RBM4BQ9BQ04 359 aaKnown RBP16.79■□□□□ 0.28
LINC00654-202ENST00000589201 DNAJC27Q9NZQ0 273 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 KCNS2Q9ULS6 477 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 PPP1R3CQ9UQK1 317 aa16.79■□□□□ 0.28
LINC00654-202ENST00000589201 FAM157AC9JC47 383 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 F5H5P2 479 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 MRPL3P09001 348 aaKnown RBP16.78■□□□□ 0.28
LINC00654-202ENST00000589201 ALOX5APP20292 161 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 ZNF121P58317 390 aaPredicted RBP16.78■□□□□ 0.28
LINC00654-202ENST00000589201 AADACL4Q5VUY2 407 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 PRSS45Q7RTY3 260 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.78■□□□□ 0.28
LINC00654-202ENST00000589201 C10orf67Q8IYJ2 551 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 TMEM163Q8TC26 289 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 MEGF10Q96KG7 1140 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 RAB3IPQ96QF0 476 aaPredicted RBP16.78■□□□□ 0.28
LINC00654-202ENST00000589201 IL4I1Q96RQ9 567 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 GABARAPL3Q9BY60 117 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 RIBC2Q9H4K1 309 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 GCM1Q9NP62 436 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 TMEM106BQ9NUM4 274 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 TMEM160Q9NX00 188 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 LAMP5Q9UJQ1 280 aa16.78■□□□□ 0.28
LINC00654-202ENST00000589201 IGHV3-64DA0A0J9YX35 117 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 GGT3PA6NGU5 568 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 TBX1O43435 398 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 APOC1P02654 83 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 LCN1P1Q5VSP4 162 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 FAM57BQ71RH2 274 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 MEPCEQ7L2J0 689 aaKnown RBP16.77■□□□□ 0.28
LINC00654-202ENST00000589201 PEG10Q86TG7 708 aaKnown RBP16.77■□□□□ 0.28
LINC00654-202ENST00000589201 PRIMA1Q86XR5 153 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 SGK3Q96BR1 496 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 YIPF3Q9GZM5 350 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 BRD7Q9NPI1 651 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 H2AFY2Q9P0M6 372 aaPredicted RBP16.77■□□□□ 0.28
LINC00654-202ENST00000589201 ZNF319Q9P2F9 582 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 NPTNQ9Y639 398 aa16.77■□□□□ 0.28
LINC00654-202ENST00000589201 B4DSR2 109 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 XRCC2O43543 280 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 ALPLP05186 524 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 CA6P23280 308 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 SRP9P49458 86 aaKnown RBP16.76■□□□□ 0.27
LINC00654-202ENST00000589201 KRTAP21-3Q3LHN1 58 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 CHRFAM7AQ494W8 412 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 NXNL2Q5VZ03 156 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 LRRN1Q6UXK5 716 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 ZNF420Q8TAQ5 688 aaPredicted RBP16.76■□□□□ 0.27
LINC00654-202ENST00000589201 SPSB4Q96A44 273 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 ZNF665Q9H7R5 613 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 SP140LQ9H930 580 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 LPAR2Q9HBW0 351 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 S100A14Q9HCY8 104 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 CDC42EP3Q9UKI2 254 aa16.76■□□□□ 0.27
LINC00654-202ENST00000589201 ISPDA4D126 451 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 SBK2P0C263 348 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 MAB21L1Q13394 359 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 TIGD6Q17RP2 521 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 ZNF771Q7L3S4 317 aaPredicted RBP16.75■□□□□ 0.27
LINC00654-202ENST00000589201 KRT77Q7Z794 578 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 OR52H1Q8NGJ2 320 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 REEP6Q96HR9 211 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 PGAM5Q96HS1 289 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 SIGLEC11Q96RL6 698 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 BEX2Q9BXY8 128 aa16.75■□□□□ 0.27
LINC00654-202ENST00000589201 COPS3Q9UNS2 423 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms