RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ACBD4Q8NC06 268 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 OR8S1Q8NH09 359 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 GPX8Q8TED1 209 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 FAM46BQ96A09 425 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ADGRG7Q96K78 797 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 FAM173AQ9BQD7 235 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ITGB1BP2Q9UKP3 347 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF716A6NP11 495 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 TGM6O95932 706 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 LPLP06858 475 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 AKAIN1P0CW23 69 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 CCL1P22362 96 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 GFRA1P56159 465 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 METTL11BQ5VVY1 283 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 OR2M7Q8NG81 312 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 ZFAND1Q8TCF1 268 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 ADAMTS17Q8TE56 1095 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 SEH1LQ96EE3 360 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 SPACA5Q96QH8 159 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 TRAF4Q9BUZ4 470 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-208ENST00000574755 CRLF2Q9HC73 371 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 EMC3Q9P0I2 261 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 IL17BQ9UHF5 180 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 RAB22AQ9UL26 194 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 A0A1B0GUH1 482 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 E9PLN8 166 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 SULT1C2O00338 296 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 ICMTO60725 284 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 BPNT1O95861 308 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 CD3DP04234 171 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 GSTT2P0CG29 244 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 NTF4P34130 210 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 CLDN15P56746 228 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 MRPS34P82930 218 aaKnown RBP12.36□□□□□ -0.43
VPS33B-208ENST00000574755 SSBP1Q04837 148 aaKnown RBP12.36□□□□□ -0.43
VPS33B-208ENST00000574755 TNK1Q13470 666 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 RBMS2Q15434 407 aaKnown RBP12.36□□□□□ -0.43
VPS33B-208ENST00000574755 CCDC92Q53HC0 331 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-208ENST00000574755 LINC00696Q6ZRV3 163 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 AAED1Q7RTV5 226 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 ANGPTL5Q86XS5 388 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 IL22RA1Q8N6P7 574 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-208ENST00000574755 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 HYLS1Q96M11 299 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 ALKBH3Q96Q83 286 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-208ENST00000574755 HES7Q9BYE0 225 aa12.36□□□□□ -0.43
VPS33B-208ENST00000574755 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 PCNX2A6NKB5 2137 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 HCKP08631 526 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 SULT1A3P0DMM9 295 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 SULT1A4P0DMN0 295 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 ANXA7P20073 488 aaKnown RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 RAD52P43351 418 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 UNC119Q13432 240 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 OR1C1Q15619 314 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 FAM27BQ5VT28 67 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 ABLIM2Q6H8Q1 611 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 RAB12Q6IQ22 244 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 STEAP1BQ6NZ63 245 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 PAQR4Q8N4S7 273 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 CLEC1AQ8NC01 280 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 DVL3Q92997 716 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 GINS4Q9BRT9 223 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 B4GALT7Q9UBV7 327 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 ELF5Q9UKW6 265 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 ING4Q9UNL4 249 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 C5orf63A6NC05 138 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 TMEM235A6NFC5 223 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 TNFRSF10AO00220 468 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 VSIG8P0DPA2 414 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 HIST1H3AP68431 136 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 TRIP6Q15654 476 aaKnown RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 Q5BKY6 102 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 HIST2H3PS2Q5TEC6 136 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 GLDNQ6ZMI3 551 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 HIST2H3AQ71DI3 136 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF101Q8IZC7 436 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 OR51S1Q8NGJ8 323 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF845Q96IR2 970 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 SEC22CQ9BRL7 303 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-208ENST00000574755 SCPEP1Q9HB40 452 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 PLA2G3Q9NZ20 509 aa12.35□□□□□ -0.43
VPS33B-208ENST00000574755 M0R135 149 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 DBHP09172 617 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 TAS2R19P59542 299 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 PDSS1Q5T2R2 415 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 OR5AS1Q8N127 324 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 GABRG1Q8N1C3 465 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 OR14K1Q8NGZ2 314 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 ABHD3Q8WU67 409 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 SPTSSAQ969W0 71 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms