RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 RAD23AP54725 363 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 ARMCX4Q5H9R4 360 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 TEX30Q5JUR7 227 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 DRAM2Q6UX65 266 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 DOK3Q7L591 496 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 KLBQ86Z14 1044 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 CYB561A3Q8NBI2 242 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 PLPP7Q8NBV4 271 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 SLC37A3Q8NCC5 494 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 PROKR2Q8NFJ6 384 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 OR8D4Q8NGM9 314 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 C22orf15Q8WYQ4 148 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 PLEKHA8Q96JA3 519 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 TMEM246Q9BRR3 403 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 BAIAP2Q9UQB8 552 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 NOP16Q9Y3C1 178 aaKnown RBP11.92□□□□□ -0.5
COMMD4-216ENST00000567023 CD300LBA8K4G0 201 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 GMDSO60547 372 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 CCNB2O95067 398 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 ZNF205O95201 554 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 PSKH1P11801 424 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 RPS2P15880 293 aaKnown RBP11.91□□□□□ -0.5
COMMD4-216ENST00000567023 PYCR1P32322 319 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 RPS27P42677 84 aaKnown RBP11.91□□□□□ -0.5
COMMD4-216ENST00000567023 SLC25A1P53007 311 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 UBA52P62987 128 aaKnown RBP11.91□□□□□ -0.5
COMMD4-216ENST00000567023 MICAQ29983 383 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 SNAI3Q3KNW1 292 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 FAM98BQ52LJ0 330 aaKnown RBP11.91□□□□□ -0.5
COMMD4-216ENST00000567023 LRRN1Q6UXK5 716 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 MRPL21Q7Z2W9 205 aaKnown RBP11.91□□□□□ -0.5
COMMD4-216ENST00000567023 ADGRG5Q8IZF4 528 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 AQP11Q8NBQ7 271 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 SPRYD4Q8WW59 207 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-216ENST00000567023 RAB40AQ8WXH6 277 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-216ENST00000567023 LRGUKQ96M69 825 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 DGCR6LQ9BY27 220 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 ZNF69Q9UC07 566 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 POMPQ9Y244 141 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 PPIAL4AQ9Y536 164 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 DOCK11Q5JSL3 2073 aa11.91□□□□□ -0.5
COMMD4-216ENST00000567023 IGHV3-64DA0A0J9YX35 117 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 TVP23AA6NH52 213 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 RAP2AP10114 183 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 IRF2P14316 349 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 HOXB6P17509 224 aaKnown RBP11.9□□□□□ -0.5
COMMD4-216ENST00000567023 PRTN3P24158 256 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 FMO3P31513 532 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 PSMB10P40306 273 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 RASSF2P50749 326 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 BLVRAP53004 296 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 PRSS12P56730 875 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 GNB2P62879 340 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 ZNF92Q03936 586 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 OR2T5Q6IEZ7 315 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 BTNL3Q6UXE8 466 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
COMMD4-216ENST00000567023 DCDC5Q6ZRR9 648 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 C9orf139Q6ZV77 190 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 NLRC3Q7RTR2 1065 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 DCXRQ7Z4W1 244 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 SIGLECL1Q8N7X8 197 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 C3orf56Q8N813 242 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 OR2T33Q8NG76 320 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 OR51L1Q8NGJ5 315 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 OR2T29Q8NH02 315 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 OR4Q3Q8NH05 313 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 UPRTQ96BW1 309 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 KCNJ15Q99712 375 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 TSSK6Q9BXA6 273 aa11.9□□□□□ -0.5
COMMD4-216ENST00000567023 MRPL15Q9P015 296 aaKnown RBP11.9□□□□□ -0.5
COMMD4-216ENST00000567023 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 KIR2DS1A0A191URI9 304 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 TCRBV3S1A0A5B6 114 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 DHRS12A0PJE2 317 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 ZNF593O00488 134 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-216ENST00000567023 FAM20BO75063 409 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 SPI1P17947 270 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 CA6P23280 308 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 ENTPD1P49961 510 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 PPP1R8Q12972 351 aaKnown RBP11.89□□□□□ -0.51
COMMD4-216ENST00000567023 CRMP1Q14194 572 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 FLOT2Q14254 428 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 GK3PQ14409 553 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 OR8G1Q15617 311 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 MPPED2Q15777 294 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 FAM201AQ5SY85 155 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 LYPD4Q6UWN0 246 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 ZNF841Q6ZN19 808 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 RHOUQ7L0Q8 258 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 BCL6BQ8N143 479 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-216ENST00000567023 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 OR11L1Q8NGX0 322 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 CANT1Q8WVQ1 401 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 SPSB4Q96A44 273 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 ZMYND19Q96E35 227 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms