RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 RPL27P61353 136 aaKnown RBP10.99□□□□□ -0.65
LDLR-205ENST00000557933 MICBQ29980 383 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 FAM69BQ5VUD6 431 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 CATSPERDQ86XM0 798 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 OR4K15Q8NH41 348 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 CLCC1Q96S66 551 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 MRI1Q9BV20 369 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 UQCC1Q9NVA1 299 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 DUX4Q9UBX2 424 aa10.99□□□□□ -0.65
LDLR-205ENST00000557933 IGLV1-36A0A0B4J1U3 117 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 SGCEO43556 437 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 SSX5O60225 188 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 OR3A4PP47883 348 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 SLC37A1P57057 533 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 LANCL3Q6ZV70 420 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 OR52N5Q8NH56 324 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 SCARF2Q96GP6 870 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 CNTNAP3BQ96NU0 1288 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 ELL3Q9HB65 397 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 ATPIF1Q9UII2 106 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 RAD51DO75771 328 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 BGLAPP02818 100 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 H2BFMP0C1H6 154 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 CBX5P45973 191 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 EMP2P54851 167 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 F2RL1P55085 397 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 OR2B8PP59922 312 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 DLX2Q07687 328 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 ANKRD55Q3KP44 614 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 ZNF260Q3ZCT1 412 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 KRBOX4Q5JUW0 171 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 KCTD18Q6PI47 426 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 SLC25A42Q86VD7 318 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 LILRB1Q8NHL6 650 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 LRFN5Q96NI6 719 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 NAA11Q9BSU3 229 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 FBRSQ9HAH7 460 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 RHOFQ9HBH0 211 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 POLR1DQ9Y2S0 133 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 RFNGQ9Y644 331 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 TNRC18O15417 2968 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 NUP210LQ5VU65 1888 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 TMED7-TICAM2A0A0A6YYA0 188 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 TXNL1O43396 289 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 SYT7O43581 403 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 SNRNP70P08621 437 aaKnown RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 SFTA3P0C7M3 94 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 CEBPGP53567 150 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 MFAP5Q13361 173 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 ZNF704Q6ZNC4 412 aaPredicted RBP10.98□□□□□ -0.65
LDLR-205ENST00000557933 SFT2D1Q8WV19 159 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 MITD1Q8WV92 249 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 SECTM1Q8WVN6 248 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 ARL11Q969Q4 196 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 C5orf34Q96MH7 638 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 G6PC2Q9NQR9 355 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 COA4Q9NYJ1 87 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 AMDHD2Q9Y303 409 aa10.98□□□□□ -0.65
LDLR-205ENST00000557933 A0A0A6YYD4 124 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 ZNF432O94892 652 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 ACAA1P09110 424 aaPredicted RBP10.97□□□□□ -0.65
LDLR-205ENST00000557933 THEGLP0DJG4 465 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 TPT1P13693 172 aaKnown RBP10.97□□□□□ -0.65
LDLR-205ENST00000557933 KLK2P20151 261 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 MEOX2P50222 304 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 CLDN6P56747 220 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 GLO1Q04760 184 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 PLCXD2Q0VAA5 305 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 FUT7Q11130 342 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 ARFRP1Q13795 201 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 CCDC157Q569K6 752 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 FNDC7Q5VTL7 733 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 GPER1Q99527 375 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 PRRT1Q99946 306 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 C5orf66Q9H5L9 145 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 MAP1BP46821 2468 aaKnown RBP10.97□□□□□ -0.65
LDLR-205ENST00000557933 hCG_1809904A0A1W2PP81 198 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 A0A1W2PR64 198 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 A0A1W2PRV1 198 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 METTL21EPA6NDL7 271 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 ADAM10O14672 748 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 CPT2P23786 658 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 NSDHLQ15738 373 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 PLAC9Q5JTB6 97 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 C1orf140Q5VVS0 124 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 GLIPR1L1Q6UWM5 242 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 CLEC18BQ6UXF7 455 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 MAMDC2Q7Z304 686 aaPredicted RBP10.97□□□□□ -0.65
LDLR-205ENST00000557933 ABHD12BQ7Z5M8 362 aaPredicted RBP10.97□□□□□ -0.65
LDLR-205ENST00000557933 CCDC36Q8IYA8 594 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 IP6K3Q96PC2 410 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 ALX4Q9H161 411 aaPredicted RBP10.97□□□□□ -0.65
LDLR-205ENST00000557933 C8orf33Q9H7E9 229 aaPredicted RBP10.97□□□□□ -0.65
LDLR-205ENST00000557933 RPS10P5Q9NQ39 176 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 CYTL1Q9NRR1 136 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 NDRG3Q9UGV2 375 aa10.97□□□□□ -0.65
LDLR-205ENST00000557933 PCOLCE2Q9UKZ9 415 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms