RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FASP25445 335 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 SLC3A1Q07837 685 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 MRPL21Q7Z2W9 205 aaKnown RBP17.3■□□□□ 0.36
VTI1B-205ENST00000555543 PLEKHA8Q96JA3 519 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 SIGLEC11Q96RL6 698 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 GABARAPL1Q9H0R8 117 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 TVP23BQ9NYZ1 205 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 PPP1R3CQ9UQK1 317 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 NPTNQ9Y639 398 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 G3V2T6 193 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 M0R129 80 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 IGHV2-70P01814 119 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 EPHA2P29317 976 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 OPRL1P41146 370 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 NAA10P41227 235 aaPredicted RBP17.29■□□□□ 0.36
VTI1B-205ENST00000555543 CX3CR1P49238 355 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 MMP16P51512 607 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 GRB2P62993 217 aaKnown RBP17.29■□□□□ 0.36
VTI1B-205ENST00000555543 PTGES3Q15185 160 aaKnown RBP17.29■□□□□ 0.36
VTI1B-205ENST00000555543 SNAPC1Q16533 368 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 CXXC5Q7LFL8 322 aaKnown RBP17.29■□□□□ 0.36
VTI1B-205ENST00000555543 GLCCI1Q86VQ1 547 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 TMEM186Q96B77 213 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 GAL3ST1Q99999 423 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 GCM1Q9NP62 436 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 KRT84Q9NSB2 600 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 KLHDC2Q9Y2U9 406 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 N6AMT1Q9Y5N5 214 aa17.29■□□□□ 0.36
VTI1B-205ENST00000555543 COL6A5A8TX70 2615 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 CD300LBA8K4G0 201 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 SRD5A1P18405 259 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 APOFQ13790 326 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 KDM4DQ6B0I6 523 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 CCDC121Q6ZUS5 278 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 SHFQ7M4L6 423 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 OR51F2Q8NH61 342 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 OTOSQ8NHW6 89 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 ZNF420Q8TAQ5 688 aaPredicted RBP17.28■□□□□ 0.36
VTI1B-205ENST00000555543 RAB39BQ96DA2 213 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 REPIN1Q9BWE0 567 aaKnown RBP17.28■□□□□ 0.36
VTI1B-205ENST00000555543 SEMA6AQ9H2E6 1030 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 TMEM100Q9NV29 134 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 HIF1ANQ9NWT6 349 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 DNAJC27Q9NZQ0 273 aa17.28■□□□□ 0.36
VTI1B-205ENST00000555543 TMEFF2Q9UIK5 374 aaPredicted RBP17.28■□□□□ 0.36
VTI1B-205ENST00000555543 CCDC182A6NF36 153 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 PRKYO43930 277 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 FCGR1AP12314 374 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 HNF1AP20823 631 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 HSD11B1P28845 292 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 SLC15A1P46059 708 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 RPS7P62081 194 aaKnown RBP17.27■□□□□ 0.36
VTI1B-205ENST00000555543 ESRRGP62508 458 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 SLC35D3Q5M8T2 416 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 PRSS45Q7RTY3 260 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 PEG10Q86TG7 708 aaKnown RBP17.27■□□□□ 0.36
VTI1B-205ENST00000555543 ZDHHC13Q8IUH4 622 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 SPRYD4Q8WW59 207 aaPredicted RBP17.27■□□□□ 0.36
VTI1B-205ENST00000555543 PYDC1Q8WXC3 89 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 MDFIQ99750 246 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 TEX12Q9BXU0 123 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 UBAP1Q9NZ09 502 aa17.27■□□□□ 0.36
VTI1B-205ENST00000555543 TMEM178BH3BS89 294 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 ANXA2P07355 339 aaKnown RBP17.26■□□□□ 0.35
VTI1B-205ENST00000555543 LYNP07948 512 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 SBK2P0C263 348 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 CA6P23280 308 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 SRP9P49458 86 aaKnown RBP17.26■□□□□ 0.35
VTI1B-205ENST00000555543 MAB21L1Q13394 359 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 ZMYND11Q15326 602 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 BCDIN3DQ7Z5W3 292 aaKnown RBP17.26■□□□□ 0.35
VTI1B-205ENST00000555543 MOGAT3Q86VF5 341 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 DVL3Q92997 716 aaPredicted RBP17.26■□□□□ 0.35
VTI1B-205ENST00000555543 SPSB4Q96A44 273 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 TOR3AQ9H497 397 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 OAZ3Q9UMX2 235 aa17.26■□□□□ 0.35
VTI1B-205ENST00000555543 GGT3PA6NGU5 568 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 ZAR1LA6NP61 321 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 TBX1O43435 398 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 PLPP2O43688 288 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 CYB5R3P00387 301 aaPredicted RBP17.25■□□□□ 0.35
VTI1B-205ENST00000555543 IFNA2P01563 188 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 PMELP40967 661 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 HCCSP53701 268 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 ZNF121P58317 390 aaPredicted RBP17.25■□□□□ 0.35
VTI1B-205ENST00000555543 BTG1P62324 171 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 KPNB1Q14974 876 aaKnown RBP17.25■□□□□ 0.35
VTI1B-205ENST00000555543 SLX4IPQ5VYV7 408 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 FAM57BQ71RH2 274 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 ZNF454Q8N9F8 522 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 OR56B2PQ8NGI1 322 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 THEM6Q8WUY1 208 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 CENPNQ96H22 339 aaPredicted RBP17.25■□□□□ 0.35
VTI1B-205ENST00000555543 CIB1Q99828 191 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 G6PC2Q9NQR9 355 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 ZNF319Q9P2F9 582 aa17.25■□□□□ 0.35
VTI1B-205ENST00000555543 SAC3D1A6NKF1 404 aa17.24■□□□□ 0.35
VTI1B-205ENST00000555543 XRCC2O43543 280 aa17.24■□□□□ 0.35
VTI1B-205ENST00000555543 ZNF205O95201 554 aa17.24■□□□□ 0.35
VTI1B-205ENST00000555543 MRPL3P09001 348 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms