RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ZNF620Q6ZNG0 422 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 KIR3DL3Q8N743 410 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 PNLDC1Q8NA58 520 aaKnown RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 FANK1Q8TC84 345 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 SPRYD4Q8WW59 207 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 GATAD2BQ8WXI9 593 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 DYRK2Q92630 601 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 SLCO4A1Q96BD0 722 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 TECTBQ96PL2 329 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 NMNAT3Q96T66 252 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 PCGF1Q9BSM1 259 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 CHIAQ9BZP6 476 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 TRIM15Q9C019 465 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 MARCH7Q9H992 704 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 SRA1Q9HD15 236 aaKnown RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 PNRC2Q9NPJ4 139 aaKnown RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 DCAF13Q9NV06 445 aaKnown RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 TMCC3Q9ULS5 477 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 SAMD4AQ9UPU9 718 aaKnown RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 TRAV38-1A0A0B4J264 116 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 M0QZ24 198 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 M0R135 149 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 TIMM23O14925 209 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 CCDC22O60826 627 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 TOX4O94842 621 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 NCK1P16333 377 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 HIST1H1CP16403 213 aaKnown RBP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 OTX1P32242 354 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 SF3A3Q12874 501 aaKnown RBP eCLIP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 MPPED2Q15777 294 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 METTL11BQ5VVY1 283 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 MRPL21Q7Z2W9 205 aaKnown RBP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 SPERTQ8NA61 448 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 TBC1D15Q8TC07 691 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 SPTSSAQ969W0 71 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 ZNF799Q96GE5 643 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 WDFY2Q96P53 400 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 TBX15Q96SF7 602 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 MMP27Q9H306 513 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 OR52D1Q9H346 318 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 MMADHCQ9H3L0 296 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 CCDC134Q9H6E4 229 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 RPRD1BQ9NQG5 326 aaKnown RBP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 UFSP2Q9NUQ7 469 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 ACOXLQ9NUZ1 547 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 MRPL15Q9P015 296 aaKnown RBP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 PDP1Q9P0J1 537 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-221ENST00000550914 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
PTCH1-221ENST00000550914 A0A0G2JK05 382 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 ECDO95905 644 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-221ENST00000550914 SFTPBP07988 381 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 CA6P23280 308 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 MZT1Q08AG7 82 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 RUSC1-AS1Q66K80 236 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 GLYATQ6IB77 296 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 NAA40Q86UY6 237 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 OR4K13Q8NH42 304 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 OR52J3Q8NH60 311 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 ADAT1Q9BUB4 502 aaKnown RBP10.65□□□□□ -0.7
PTCH1-221ENST00000550914 IFT27Q9BW83 186 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 OPA3Q9H6K4 179 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 KAAG1Q9UBP8 84 aa10.65□□□□□ -0.7
PTCH1-221ENST00000550914 IGHV1-69DA0A0B4J2H0 117 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 OR6C68A6NDL8 312 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 OOEPA6NGQ2 149 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 ADAM20O43506 726 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 GMNNO75496 209 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 SASH3O75995 380 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 IGHV1-69P01742 117 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 NOS3P29474 1203 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 IFNGR2P38484 337 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 NUDT2P50583 147 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 PRSS12P56730 875 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 OR8B8Q15620 311 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 DRAM2Q6UX65 266 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 RHOUQ7L0Q8 258 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 LDLRAD3Q86YD5 345 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 C19orf18Q8NEA5 215 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 MAP6Q96JE9 813 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 DMRTB1Q96MA1 342 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 CCT8L2Q96SF2 557 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 GORASP2Q9H8Y8 452 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 SMURF1Q9HCE7 757 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 TNFRSF19Q9NS68 423 aa10.64□□□□□ -0.71
PTCH1-221ENST00000550914 MRPL22Q9NWU5 206 aaKnown RBP10.64□□□□□ -0.71
PTCH1-221ENST00000550914 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-221ENST00000550914 GGT3PA6NGU5 568 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 CLPXO76031 633 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 DIRAS1O95057 198 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 GADD45GO95257 159 aa10.63□□□□□ -0.71
PTCH1-221ENST00000550914 LHBP01229 141 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms