RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 RHOUQ7L0Q8 258 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF771Q7L3S4 317 aaPredicted RBP6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 PRSS45Q7RTY3 260 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 CPLX4Q7Z7G2 160 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 DEFB107AQ8IZN7 70 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 C1orf87Q8N0U7 546 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 FITM2Q8N6M3 262 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 C3orf56Q8N813 242 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC37A3Q8NCC5 494 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 C22orf15Q8WYQ4 148 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 SLCO4A1Q96BD0 722 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF799Q96GE5 643 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 PLEKHA8Q96JA3 519 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 MRI1Q9BV20 369 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 CDADC1Q9BWV3 514 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 MUC13Q9H3R2 512 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 FN3KQ9H479 309 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 WDR76Q9H967 626 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 MARCH7Q9H992 704 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 OR5V1Q9UGF6 321 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 BAIAP2Q9UQB8 552 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 COMMD3-BMI1R4GMX3 469 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 V9GYQ6 96 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 WNK1Q9H4A3 2382 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 DNAJC9-AS1A6NH13 148 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 TNFRSF11BO00300 401 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 PHYHO14832 338 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 FAM20BO75063 409 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 FCN3O75636 299 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 DCTN3O75935 186 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF205O95201 554 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 T-ENOLP0DO92 83 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 IGHV4-38-2P0DP08 117 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 RPS2P15880 293 aaKnown RBP6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF823P16415 610 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 ATP6V1B2P21281 511 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 PYCR1P32322 319 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 CFHR2P36980 270 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 NPY4RP50391 375 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 MNAT1P51948 309 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 GNB2P62879 340 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 MS4A2Q01362 244 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 FOXL1Q12952 345 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 MALLQ13021 153 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 TRIM25Q14258 630 aaKnown RBP6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 GK3PQ14409 553 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC9A3R2Q15599 337 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 MICAQ29983 383 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 ARMCX4Q5H9R4 360 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 GLYATL3Q5SZD4 288 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 WDR25Q64LD2 544 aaPredicted RBP6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 LYPD2Q6UXB3 125 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 KRT74Q7RTS7 529 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 C11orf53Q8IXP5 236 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 SPERTQ8NA61 448 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 CYB561A3Q8NBI2 242 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 BHLHE23Q8NDY6 225 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 OR9Q2Q8NGE9 314 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 OR52L1Q8NGH7 329 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 OR4Q3Q8NH05 313 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 SPRYD4Q8WW59 207 aaPredicted RBP6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 SPTSSAQ969W0 71 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 KCNJ15Q99712 375 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 FAM107BQ9H098 131 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 OPA3Q9H6K4 179 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF696Q9H7X3 374 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 VNN3Q9NY84 501 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 KAAG1Q9UBP8 84 aa6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 NOP16Q9Y3C1 178 aaKnown RBP6.97□□□□□ -1.29
SMARCB1-207ENST00000491967 IGHV3-64DA0A0J9YX35 117 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 ARRDC5A6NEK1 342 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 C22orf46C9J442 243 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 LGALS8O00214 317 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF593O00488 134 aaPredicted RBP6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 TMPRSS2O15393 492 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 WIPF1O43516 503 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 NDUFA2O43678 99 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 CCNB2O95067 398 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 HLA-DQA2P01906 255 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 LIPFP07098 398 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 MMP9P14780 707 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 CA6P23280 308 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 FMO3P31513 532 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 DDOSTP39656 456 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 RPS27P42677 84 aaKnown RBP6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 MTNR1AP48039 350 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 PITPNBP48739 271 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 ENTPD1P49961 510 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 BLVRAP53004 296 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 PRSS12P56730 875 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 CRMP1Q14194 572 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 OR2T5Q6IEZ7 315 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 BTNL3Q6UXE8 466 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 RBMS3Q6XE24 437 aaKnown RBP6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 NLRC3Q7RTR2 1065 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 MRPL21Q7Z2W9 205 aaKnown RBP6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 DCXRQ7Z4W1 244 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 PARP8Q8N3A8 854 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms