RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 IL1RAPQ9NPH3 570 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 CIDEBQ9UHD4 219 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 PRYO14603 147 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 BIRC5O15392 142 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 FZD7O75084 574 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SMIM24O75264 130 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 RGS11O94810 467 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 TOXO94900 526 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 EPPINO95925 133 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 MELTFP08582 738 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CSNK2A2P19784 350 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 MAOAP21397 527 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 C21orf33P30042 268 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 PTGDSP41222 190 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 AESQ08117 197 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 GUSBP1Q15486 140 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 C3AR1Q16581 482 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 ESCO2Q56NI9 601 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 TNFAIP8L3Q5GJ75 292 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 NUFIP2Q7Z417 695 aaKnown RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 IFT20Q8IY31 132 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 METTL27Q8N6F8 245 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 RELL2Q8NC24 303 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SLC37A3Q8NCC5 494 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SEMA6DQ8NFY4 1073 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 LGALS14Q8TCE9 139 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SLC38A5Q8WUX1 472 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 MAFIPQ8WZ33 124 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 PINX1Q96BK5 328 aaKnown RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 R3HDM4Q96D70 268 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 F2RL3Q96RI0 385 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 TTTY12Q9BZ98 90 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 MMP28Q9H239 520 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 DEPPQ9NTK1 212 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF629Q9UEG4 869 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 MIOXQ9UGB7 285 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF225Q9UK10 706 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 NDUFAF1Q9Y375 327 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 USH1CQ9Y6N9 552 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 LAMA5O15230 3695 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SEC16AO15027 2179 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 TLN1Q9Y490 2541 aaKnown RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 TGOLN2O43493 480 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 FGF17O60258 216 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 PRKNO60260 465 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CPMP14384 443 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 GPX3P22352 226 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CERS1P27544 350 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 PPIFP30405 207 aaKnown RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 DDOSTP39656 456 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 GDF5P43026 501 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 TMED10P49755 219 aaKnown RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 GZMKP49863 264 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CDK9P50750 372 aaKnown RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CD81P60033 236 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 TNFRSF9Q07011 255 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CHRFAM7AQ494W8 412 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 UNC50Q53HI1 259 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 RTL6Q6ICC9 239 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CCDC71LQ8N9Z2 235 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 OR4N2Q8NGD1 307 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 OR1F12Q8NHA8 337 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 NEIL3Q8TAT5 605 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 MYDGFQ969H8 173 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 ISOC2Q96AB3 205 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SARAFQ96BY9 339 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 GRAMD2BQ96HH9 432 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 PRR25Q96S07 402 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 CSF3RQ99062 836 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 ALG9Q9H6U8 611 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 HRASLSQ9HDD0 168 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SLC17A5Q9NRA2 495 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 BOKQ9UMX3 212 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SLC22A13Q9Y226 551 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 SCN3AQ9NY46 2000 aa4.6□□□□□ -1.67
CCDC39-205ENST00000485055 KBTBD11-OT1A0A1B0GTJ5 212 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 LRRC30A6NM36 301 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 A8MT66 165 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 C17orf105B2RV13 164 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 F5H697 171 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 MANBAO00462 879 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 PRRG2O14669 202 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 PPP1R2P9O14990 202 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 TMPRSS11DO60235 418 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 PFDN1O60925 122 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 CNIH1O95406 144 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ESRRBO95718 433 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SERPINA1P01009 418 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 CD5P06127 495 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 RFPL3SP0C7P2 107 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 CREB1P16220 341 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF12P17014 697 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 TAC1P20366 129 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 SLC18A1P54219 525 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 TAS2R60P59551 318 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 PIGFQ07326 219 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF415Q09FC8 603 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 IL18R1Q13478 541 aa4.59□□□□□ -1.67
CCDC39-205ENST00000485055 GANABQ14697 944 aaKnown RBP4.59□□□□□ -1.67
CCDC39-205ENST00000485055 ZSWIM7Q19AV6 140 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms