RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RPS27P42677 84 aaKnown RBP12.78□□□□□ -0.36
VTI1A-203ENST00000472892 GNB2P62879 340 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 FAM201AQ5SY85 155 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 LRRN1Q6UXK5 716 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 BCL6BQ8N143 479 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-203ENST00000472892 FITM2Q8N6M3 262 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 SLC37A3Q8NCC5 494 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 NEIL1Q96FI4 390 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-203ENST00000472892 PLEKHA8Q96JA3 519 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 MAGIXQ9H6Y5 334 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
VTI1A-203ENST00000472892 PSKH1P11801 424 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 IRF2P14316 349 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 ANOS1P23352 680 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 PRTN3P24158 256 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 SLC25A1P53007 311 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF92Q03936 586 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 MPPED2Q15777 294 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 MICAQ29983 383 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 SNAI3Q3KNW1 292 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 AWAT1Q58HT5 328 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 TEX30Q5JUR7 227 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 LYPD4Q6UWN0 246 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 DRAM2Q6UX65 266 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 BTNL3Q6UXE8 466 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 DCDC5Q6ZRR9 648 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 MRPL21Q7Z2W9 205 aaKnown RBP12.77□□□□□ -0.37
VTI1A-203ENST00000472892 DCXRQ7Z4W1 244 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 ARHGAP24Q8N264 748 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 AQP11Q8NBQ7 271 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 PLPP7Q8NBV4 271 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 OR51L1Q8NGJ5 315 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 UPRTQ96BW1 309 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF48Q96MX3 618 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-203ENST00000472892 TSSK6Q9BXA6 273 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 BAIAP2Q9UQB8 552 aa12.77□□□□□ -0.37
VTI1A-203ENST00000472892 NOP16Q9Y3C1 178 aaKnown RBP12.77□□□□□ -0.37
VTI1A-203ENST00000472892 C5orf63A6NC05 138 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF593O00488 134 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-203ENST00000472892 GMDSO60547 372 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 FAM20BO75063 409 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 CA6P23280 308 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 FMO3P31513 532 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 PSMB10P40306 273 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 PITPNBP48739 271 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 MS4A2Q01362 244 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 PPP1R8Q12972 351 aaKnown RBP12.76□□□□□ -0.37
VTI1A-203ENST00000472892 TRIM25Q14258 630 aaKnown RBP12.76□□□□□ -0.37
VTI1A-203ENST00000472892 OR8G1Q15617 311 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 GLYATL3Q5SZD4 288 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 PRAMEF6Q5VXH4 476 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 LCN8Q6JVE9 175 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 LYPD2Q6UXB3 125 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF841Q6ZN19 808 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 C9orf139Q6ZV77 190 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 NLRC3Q7RTR2 1065 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 DHFR2Q86XF0 187 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF511Q8NB15 262 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 OR8B3Q8NGG8 313 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 OR9Q1Q8NGQ5 310 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 OR4Q3Q8NH05 313 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 ZMYND19Q96E35 227 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-203ENST00000472892 NSL1Q96IY1 281 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 C1orf147Q96MC9 270 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-203ENST00000472892 OR8B2Q96RD0 313 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 DGCR6LQ9BY27 220 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 MUC13Q9H3R2 512 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 UFSP2Q9NUQ7 469 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 TBC1D23Q9NUY8 699 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 MRPL15Q9P015 296 aaKnown RBP12.76□□□□□ -0.37
VTI1A-203ENST00000472892 COMMD3-BMI1R4GMX3 469 aa12.76□□□□□ -0.37
VTI1A-203ENST00000472892 PLATP00750 562 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 IGHV4-38-2P0DP08 117 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 HKR1P10072 659 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 SPI1P17947 270 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 ENTPD1P49961 510 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 CRMP1Q14194 572 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 WDR25Q64LD2 544 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-203ENST00000472892 OR2T5Q6IEZ7 315 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 OR2T33Q8NG76 320 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 OR2T29Q8NH02 315 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 OR2AE1Q8NHA4 323 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 COPS4Q9BT78 406 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 MS4A7Q9GZW8 240 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-203ENST00000472892 ZMAT3Q9HA38 289 aaKnown RBP12.75□□□□□ -0.37
VTI1A-203ENST00000472892 FN3KRPQ9HA64 309 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 VNN3Q9NY84 501 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 RNF7Q9UBF6 113 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 CLN8Q9UBY8 286 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 SAMHD1Q9Y3Z3 626 aaKnown RBP12.75□□□□□ -0.37
VTI1A-203ENST00000472892 U3KQV3 271 aa12.75□□□□□ -0.37
VTI1A-203ENST00000472892 GGT3PA6NGU5 568 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 DNAJC9-AS1A6NH13 148 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms