RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PLPPR2Q96GM1 343 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PRDM7Q9NQW5 492 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CCDC187A0A096LP49 1063 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TRABD2BA6NFA1 517 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SPRY3O43610 288 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 BCL3P20749 454 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 LYZP61626 148 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CACNG7P62955 275 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 RNF212Q495C1 297 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CST9Q5W186 159 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF429Q86V71 674 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 DOLPP1Q86YN1 238 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 WFDC3Q8IUB2 231 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SIRT6Q8N6T7 355 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 C5orf17Q8NAS9 161 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF511Q8NB15 262 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ACPTQ9BZG2 426 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 KCND3Q9UK17 655 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 NUMBLQ9Y6R0 609 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 DLG5Q8TDM6 1919 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 IGHV3-20A0A0C4DH32 117 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 FCN1O00602 326 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 AQP9O43315 295 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SEMA7AO75326 666 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 GIPP09681 153 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CLEC2LP0C7M8 214 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PI3P19957 117 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 HIST1H1TP22492 207 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PTBP1P26599 531 aaKnown RBP eCLIP6.29□□□□□ -1.41e-7■■■■■ 45.2
BRCA1-210ENST00000471181 COMPP49747 757 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ZXDAP98168 799 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 FOXK2Q01167 660 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 C5orf46Q6UWT4 87 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SLC35B4Q969S0 331 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PHYHIPLQ96FC7 376 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 FOXC2Q99958 501 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 MARCH5Q9NX47 278 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 DHCR7Q9UBM7 475 aaKnown RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 DHRS7CA6NNS2 312 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 SIAH2O43255 324 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 SYNGR2O43760 224 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 PRKRAO75569 313 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ATP1B1P05026 303 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 CR2P20023 1033 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ZBTB25P24278 435 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 RAB32Q13637 225 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 BAK1Q16611 211 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 PRSS8Q16651 343 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 LRRC10Q5BKY1 277 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 MAML2Q8IZL2 1156 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 OR2G2Q8NGZ5 317 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 FBXO17Q96EF6 278 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ABHD14AQ9BUJ0 271 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 RBPJLQ9UBG7 517 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 NDUFB3O43676 98 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 MELTFP08582 738 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 OPRM1P35372 400 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 INHBCP55103 352 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 PPIAP62937 165 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 TRA2BP62995 288 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 INSM1Q01101 510 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 DEFB109BQ30KR1 87 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 SPINK9Q5DT21 86 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 DPY19L2P2Q6ZN68 376 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ETFBKMTQ8IXQ9 262 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 KCTD12Q96CX2 325 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 MED30Q96HR3 178 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 MS4A10Q96PG2 267 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 RBFOX1Q9NWB1 397 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 RNF24Q9Y225 148 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 MAP2P11137 1827 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 OR5B21A6NL26 309 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 E5RGE8 158 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 M0R143 59 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 LMX1BO60663 402 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 CYC1P08574 325 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 TBXA2RP21731 343 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 PPP1CCP36873 323 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 EIF1P41567 113 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 SUCLG1P53597 346 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ADPRHP54922 357 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 SOWAHCQ53LP3 525 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 FNDC7Q5VTL7 733 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 LAIR1Q6GTX8 287 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 RNF113BQ8IZP6 322 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 UMODL1-AS1Q8N2C9 162 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 OR8A1Q8NGG7 326 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 PFN4Q8NHR9 129 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 CA5BP1Q8WTZ4 195 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ZPBPQ9BS86 351 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 SDR39U1Q9NRG7 319 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 NTNG1Q9Y2I2 539 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 NSG2Q9Y328 171 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 PRSS21Q9Y6M0 314 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 H3BP45 60 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ANKRD34CP0C6C1 535 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ACHEP22303 614 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ARR3P36575 388 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 CSNK1EP49674 416 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 TPBGQ13641 420 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms