RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 NIPSNAP1Q9BPW8 284 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 RBM4Q9BWF3 364 aaKnown RBP7.61□□□□□ -1.19
DDX39B-216ENST00000462421 C1QTNF5Q9BXJ0 243 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 MROQ9BYG7 248 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 RGCCQ9H4X1 137 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 NIPAL2Q9H841 368 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 WDR76Q9H967 626 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 TVP23BQ9NYZ1 205 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 CADP27708 2225 aa7.61□□□□□ -1.19
DDX39B-216ENST00000462421 MAP1AP78559 2803 aaPredicted RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 SLC22A31A6NKX4 558 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 DCTN6O00399 190 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 TCF21O43680 179 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 GMDSO60547 372 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 TIPRLO75663 272 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 RPS2P15880 293 aaKnown RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 IGFBP5P24593 272 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 CDC42P60953 191 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 HIST1H3AP68431 136 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 ZNF829Q3KNS6 432 aaPredicted RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 TMEM155Q4W5P6 130 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 ARMCX4Q5H9R4 360 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 TEX30Q5JUR7 227 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 HIST2H3PS2Q5TEC6 136 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 KCTD8Q6ZWB6 473 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 HIST2H3AQ71DI3 136 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 DPY19L4Q7Z388 723 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 THAP5Q7Z6K1 395 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 GID4Q8IVV7 300 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 CELF2-AS1Q8N7Q2 184 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 ZNF511Q8NB15 262 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 PAPD5Q8NDF8 572 aaKnown RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 OR8D4Q8NGM9 314 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 OR4Q3Q8NH05 313 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 ASB17Q8WXJ9 295 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 GTF3AQ92664 365 aaKnown RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 STMN2Q93045 179 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 ZMYND19Q96E35 227 aaPredicted RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 MRPL48Q96GC5 212 aaKnown RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 MICU1Q9BPX6 476 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 OSBPL10Q9BXB5 764 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 CADM1Q9BY67 442 aaKnown RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 DDX28Q9NUL7 540 aaKnown RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 IMPAD1Q9NX62 359 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 DNAJC27Q9NZQ0 273 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 MRPL15Q9P015 296 aaKnown RBP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 MIOXQ9UGB7 285 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 ZNF391Q9UJN7 358 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 IKZF2Q9UKS7 526 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.6□□□□□ -1.19
DDX39B-216ENST00000462421 GTF2A1LQ9UNN4 478 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 MTORP42345 2549 aa7.6□□□□□ -1.19
DDX39B-216ENST00000462421 A0A096LNT2 108 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 FAM183AA6NL82 134 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 CD300LBA8K4G0 201 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 RP2O75695 350 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 FPR2P25090 351 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 NAA10P41227 235 aaPredicted RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 CRISP1P54107 249 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 GNB2P62879 340 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 IL5RAQ01344 420 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 POU4F2Q12837 409 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 APOFQ13790 326 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 GK2Q14410 553 aaPredicted RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 OR8B8Q15620 311 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 ATP6AP1Q15904 470 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 ZFP1Q6P2D0 407 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 IL17RELQ6ZVW7 336 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 FAM57BQ71RH2 274 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 RHOUQ7L0Q8 258 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 FAM220AQ7Z4H9 259 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 MOGAT3Q86VF5 341 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 CPOQ8IVL8 374 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 BPIFB2Q8N4F0 458 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 RFLNBQ8N5W9 214 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 BOLLQ8N9W6 283 aaKnown RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 CSNK2A3Q8NEV1 391 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 NANPQ8TBE9 248 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 RFKQ969G6 155 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 SLC7A6OSQ96CW6 309 aaPredicted RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 REEP6Q96HR9 211 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 MEGF10Q96KG7 1140 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 CNN2Q99439 309 aaKnown RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 MNTQ99583 582 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 RBM4BQ9BQ04 359 aaKnown RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 PAPOLGQ9BWT3 736 aaKnown RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 RIBC2Q9H4K1 309 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 MARCH7Q9H992 704 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 MRPL22Q9NWU5 206 aaKnown RBP7.59□□□□□ -1.19
DDX39B-216ENST00000462421 VNN3Q9NY84 501 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 FAM53CQ9NYF3 392 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 LRCH1Q9Y2L9 728 aa7.59□□□□□ -1.19
DDX39B-216ENST00000462421 PLCE1Q9P212 2302 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PPIAL4EA0A075B759 164 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 TRAV38-1A0A0B4J264 116 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF670-ZNF695F2Z2N8 137 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 PPIAL4DF5H284 164 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 F5H5P2 479 aa7.58□□□□□ -1.2
DDX39B-216ENST00000462421 MTRF1O75570 445 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms