RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 TMEM234Q8WY98 164 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZMYND19Q96E35 227 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 IMP4Q96G21 291 aaKnown RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 PDLIM2Q96JY6 352 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF385AQ96PM9 386 aaKnown RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 GABRG3Q99928 467 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 RARRES2Q99969 163 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMED9Q9BVK6 235 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF717Q9BY31 904 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ACTR6Q9GZN1 396 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 R3HDMLQ9H3Y0 253 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 NT5DC2Q9H857 520 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 AMBNQ9NP70 447 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF446Q9NWS9 450 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ELOVL5Q9NYP7 299 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 EHFQ9NZC4 300 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 VPS29Q9UBQ0 182 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 KLK11Q9UBX7 282 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 CIDEBQ9UHD4 219 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 CD84Q9UIB8 345 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 HHLA2Q9UM44 414 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 TGIF2-C20orf24A0A0A6YYL0 155 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 CENPVL3A0A0U1RRI6 287 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 A0A1W2PQ67 120 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 CLDN24A6NM45 220 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 MIF4GDA9UHW6 222 aaKnown RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF814B7Z6K7 855 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 GABRPO00591 440 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ICOSLGO75144 302 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 CST2P09228 141 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 TFPTP0C1Z6 253 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 LINC00271P0C7V0 271 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 GABRG2P18507 467 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 RPL12P30050 165 aaKnown RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 PYCR1P32322 319 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 PTGDSP41222 190 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 GALR1P47211 349 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 HNRNPA3P51991 378 aaKnown RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 LIM2P55344 173 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 DLX1P56177 255 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 RAB25P57735 213 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR12D2P58182 307 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 VSX2P58304 361 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 BRWD1-AS2P59051 145 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 TAS2R41P59536 307 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 AP1S1P61966 158 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 PPP1CBP62140 327 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 PSPHP78330 225 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 FOXF2Q12947 444 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 PPP1R1AQ13522 171 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 EIF4EBP2Q13542 120 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF235Q14590 738 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 CLINT1Q14677 625 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 MS4A13Q5J8X5 152 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 GPRC6AQ5T6X5 926 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 EPGNQ6UW88 154 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 CYHR1Q6ZMK1 362 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 SLC36A1Q7Z2H8 476 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 FAM19A5Q7Z5A7 132 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF575Q86XF7 245 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 CCDC71Q8IV32 467 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 GPD1LQ8N335 351 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF561Q8N587 486 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ARRDC1Q8N5I2 433 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 UBL4BQ8N7F7 174 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 CLDN22Q8N7P3 220 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF557Q8N988 423 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 HSD17B11Q8NBQ5 300 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMEM161BQ8NDZ6 487 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR56B4Q8NH76 319 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR2T6Q8NHC8 308 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR51E1Q8TCB6 317 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 HAVCR2Q8TDQ0 301 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 FGGYQ96C11 551 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZHX1-C8orf76Q96EF9 292 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZIM3Q96PE6 472 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 QKIQ96PU8 341 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ALKBH3Q96Q83 286 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 P2RX4Q99571 388 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 NMUR2Q9GZQ4 415 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 BOLA2Q9H3K6 86 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 TPK1Q9H3S4 243 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 UGT1A8Q9HAW9 530 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 ABCC13Q9NSE7 274 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 SLC2A6Q9UGQ3 507 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 VDAC3Q9Y277 283 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 TP53TG1Q9Y2A0 90 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 L3MBTL1Q9Y468 752 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR51B2Q9Y5P1 312 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 NUP160Q12769 1436 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 PCSK5Q92824 1860 aa3.67□□□□□ -1.82
HMGB3P21-201ENST00000452483 COL22A1Q8NFW1 1626 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMEM272A0A1B0GTI8 110 aa3.66□□□□□ -1.82
HMGB3P21-201ENST00000452483 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR11H12B2RN74 326 aa3.66□□□□□ -1.82
HMGB3P21-201ENST00000452483 ERVV-2B6SEH9 535 aa3.66□□□□□ -1.82
HMGB3P21-201ENST00000452483 ANKRD65E5RJM6 399 aa3.66□□□□□ -1.82
HMGB3P21-201ENST00000452483 F6UB75 175 aa3.66□□□□□ -1.82
HMGB3P21-201ENST00000452483 K7EMT4 169 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms