RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TECTBQ96PL2 329 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 ERMAPQ96PL5 475 aaPredicted RBP9.05□□□□□ -0.96
USP1-204ENST00000452143 PITX2Q99697 317 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 KCTD14Q9BQ13 255 aaPredicted RBP9.05□□□□□ -0.96
USP1-204ENST00000452143 PCGF1Q9BSM1 259 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 MMADHCQ9H3L0 296 aaPredicted RBP9.05□□□□□ -0.96
USP1-204ENST00000452143 EFCAB1Q9HAE3 211 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 ERVK-18Q9QC07 812 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 CYB5R1Q9UHQ9 305 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 KCNG2Q9UJ96 466 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 TMCC3Q9ULS5 477 aa9.05□□□□□ -0.96
USP1-204ENST00000452143 SOX21Q9Y651 276 aaPredicted RBP9.05□□□□□ -0.96
USP1-204ENST00000452143 CLPSL1A2RUU4 121 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 F5H5K5 113 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 M0QZ24 198 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 M0R135 149 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 LGALS8O00214 317 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 NDUFA2O43678 99 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 GMDSO60547 372 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 TOX4O94842 621 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 LCATP04180 440 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 MELTFP08582 738 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 MMP9P14780 707 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 H2AFXP16104 143 aaPredicted RBP9.04□□□□□ -0.96
USP1-204ENST00000452143 NOS3P29474 1203 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 NUDT2P50583 147 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 TPTEP56180 551 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 SMIM11AP58511 58 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 KRT72Q14CN4 511 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 OR8G1Q15617 311 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 MPPED2Q15777 294 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 RFX4Q33E94 735 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 METTL11BQ5VVY1 283 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 PRAMEF6Q5VXH4 476 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 BRICD5Q6PL45 260 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 ZNF620Q6ZNG0 422 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 LINC00346Q8IVM7 164 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 PNLDC1Q8NA58 520 aaKnown RBP9.04□□□□□ -0.96
USP1-204ENST00000452143 DYRK2Q92630 601 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 SPTSSAQ969W0 71 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 SLCO4A1Q96BD0 722 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 ZNF799Q96GE5 643 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 C7orf34Q96L11 122 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 NMNAT3Q96T66 252 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 CITED1Q99966 193 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 FUZQ9BT04 418 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 ADAT1Q9BUB4 502 aaKnown RBP9.04□□□□□ -0.96
USP1-204ENST00000452143 CHIAQ9BZP6 476 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 TRIM15Q9C019 465 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 MMP27Q9H306 513 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 OR52D1Q9H346 318 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 CCDC134Q9H6E4 229 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 OPA3Q9H6K4 179 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 MARCH7Q9H992 704 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 PNRC2Q9NPJ4 139 aaKnown RBP9.04□□□□□ -0.96
USP1-204ENST00000452143 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
USP1-204ENST00000452143 UFSP2Q9NUQ7 469 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 ACOXLQ9NUZ1 547 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 C1RLQ9NZP8 487 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 MRPL15Q9P015 296 aaKnown RBP9.04□□□□□ -0.96
USP1-204ENST00000452143 RNF7Q9UBF6 113 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 CTSZQ9UBR2 303 aa9.04□□□□□ -0.96
USP1-204ENST00000452143 TRAV38-1A0A0B4J264 116 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 A0A0G2JK05 382 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 CD300LBA8K4G0 201 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 TIMM23O14925 209 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 IDH3BO43837 385 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 CCDC22O60826 627 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 SASH3O75995 380 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 HLA-DQA2P01906 255 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 SFTPBP07988 381 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 NCK1P16333 377 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 HIST1H1CP16403 213 aaKnown RBP9.03□□□□□ -0.96
USP1-204ENST00000452143 CA6P23280 308 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 OTX1P32242 354 aaPredicted RBP9.03□□□□□ -0.96
USP1-204ENST00000452143 GGT2P36268 569 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 RELBQ01201 579 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 SF3A3Q12874 501 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP1-204ENST00000452143 RUSC1-AS1Q66K80 236 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 LDLRAD3Q86YD5 345 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 KIR3DL3Q8N743 410 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 SPERTQ8NA61 448 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 OR4C15Q8NGM1 316 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 TBC1D15Q8TC07 691 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 WDFY2Q96P53 400 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 TBX15Q96SF7 602 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 IFT27Q9BW83 186 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 SRA1Q9HD15 236 aaKnown RBP9.03□□□□□ -0.96
USP1-204ENST00000452143 SPAG4Q9NPE6 437 aa9.03□□□□□ -0.96
USP1-204ENST00000452143 DCAF13Q9NV06 445 aaKnown RBP9.03□□□□□ -0.96
USP1-204ENST00000452143 PDP1Q9P0J1 537 aaPredicted RBP9.03□□□□□ -0.96
USP1-204ENST00000452143 CENPVL3A0A0U1RRI6 287 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 OOEPA6NGQ2 149 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 ADAM20O43506 726 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 GMNNO75496 209 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 ECDO95905 644 aaPredicted RBP9.02□□□□□ -0.97
USP1-204ENST00000452143 IFNGR2P38484 337 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 MZT1Q08AG7 82 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 OR8B8Q15620 311 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms