RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 HIST1H2BDP58876 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 RPS15AP62244 130 aaKnown RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BCP62807 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TOMM34Q15785 309 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST2H2BEQ16778 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ANKRD55Q3KP44 614 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 MORN1Q5T089 497 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 LRRC18Q8N456 261 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BHQ93079 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BNQ99877 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BMQ99879 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 RARRES2Q99969 163 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SLC2A8Q9NY64 477 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 PRODH2Q9UF12 536 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GPR34Q9UPC5 381 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 PTPRZ1P23471 2315 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 MPIG6BO95866 241 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GLIPR1P48060 266 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 FAM219AQ8IW50 185 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TGM7Q96PF1 710 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ANKRD10Q9NXR5 420 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 CES1P1Q9UKY3 287 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SLCO1B1Q9Y6L6 691 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GTF3C1Q12789 2109 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TBC1D3DA0A087WVF3 549 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TBC1D3IA0A087WXS9 549 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ZNF860A6NHJ4 632 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TBC1D3LB9A6J9 549 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 RAMP1O60894 148 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TK1P04183 234 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 CHRM2P08172 466 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 FAM110CQ1W6H9 321 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TBC1D3CQ6IPX1 549 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TMPPEQ6ZT21 453 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 P4HA3Q7Z4N8 544 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TBC1D3Q8IZP1 549 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 NRTNQ99748 197 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 C1orf123Q9NWV4 160 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 MYOTQ9UBF9 498 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 KLHDC2Q9Y2U9 406 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SLC7A9P82251 487 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 SLC22A24Q8N4F4 322 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 OR51T1Q8NGJ9 327 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 CDCA3Q99618 268 aaPredicted RBP4.51□□□□□ -1.69
HERC1-201ENST00000443617 PHPT1Q9NRX4 125 aaPredicted RBP4.51□□□□□ -1.69
HERC1-201ENST00000443617 TGIF2-C20orf24A0A0A6YYL0 155 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 CXorf51AA0A1B0GTR3 108 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 TRGC2P03986 189 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 OR5B12Q96R08 314 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 EHFQ9NZC4 300 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.51□□□□□ -1.69
HERC1-201ENST00000443617 PRR32B1ATL7 298 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 MKRN2OSH3BPM6 223 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 EFSO43281 561 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 GPR137BO60478 399 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 ZNF708P17019 499 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 SLC10A1Q14973 349 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 HIKESHIQ53FT3 197 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 DCXRQ7Z4W1 244 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 HIST3H2BBQ8N257 126 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 METTL21AQ8WXB1 218 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 IP6K3Q96PC2 410 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 GDE1Q9NZC3 331 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 EMC9Q9Y3B6 208 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 NBASA2RRP1 2371 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 ZNF765Q7L2R6 523 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 SSX7Q7RTT5 188 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 TMEM123Q8N131 208 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 CCDC54Q8NEL0 328 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 PRRX2Q99811 253 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 CHST5Q9GZS9 411 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 FLRT3Q9NZU0 649 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 SUSD2Q9UGT4 822 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 TANC1Q9C0D5 1861 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 K7ESM1 405 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 MYOGP15173 224 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 EMP2P54851 167 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 ZIC1Q15915 447 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 HEPN1Q6WQI6 88 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 CDC20BQ86Y33 519 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 NKAIN3Q8N8D7 197 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 OR10AC1Q8NH08 325 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 FOXN4Q96NZ1 517 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 DNAJB12Q9NXW2 375 aaKnown RBP4.51□□□□□ -1.69
HERC1-201ENST00000443617 V9GYS6 101 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 SLX4Q8IY92 1834 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 LYPD3O95274 346 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 CSF2RAP15509 400 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 FCARP24071 287 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 LANCL3Q6ZV70 420 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 ZPLD1Q8TCW7 415 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 WDR92Q96MX6 357 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 SLC25A31Q9H0C2 315 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 MPDZO75970 2070 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 SLC35G6P0C7Q6 338 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 DNM1P46Q6ZS02 220 aa4.51□□□□□ -1.69
HERC1-201ENST00000443617 ZFP62Q8NB50 900 aaPredicted RBP4.51□□□□□ -1.69
HERC1-201ENST00000443617 ASB16Q96NS5 453 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms