RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 TINAGL1Q9GZM7 467 aaPredicted RBP10.16□□□□□ -0.78
CLDN4-202ENST00000431918 PILRBQ9UKJ0 227 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 RHBDD3Q9Y3P4 386 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 LOXL2Q9Y4K0 774 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 CXCL13O43927 109 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 SC5DO75845 299 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 HLA-AP01891 365 aaKnown RBP10.16□□□□□ -0.78
CLDN4-202ENST00000431918 ACSM4P0C7M7 580 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 GABRR1P24046 479 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 CD34P28906 385 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 EXOSC2Q13868 293 aaKnown RBP10.16□□□□□ -0.78
CLDN4-202ENST00000431918 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 GABRG1Q8N1C3 465 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 ROBO4Q8WZ75 1007 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 MCHR2Q969V1 340 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 SOSTQ9BQB4 213 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 SPTA1P02549 2419 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 F5H5P2 479 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 LINC01387J3KSC0 135 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 GNB3P16520 340 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 CARD18P57730 90 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 SORDQ00796 357 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 ZNF273Q14593 569 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 IL11RAQ14626 422 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 SHBQ15464 509 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 PLPPR5Q32ZL2 321 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 TIGD3Q6B0B8 471 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 AAED1Q7RTV5 226 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 ZSCAN1Q8NBB4 408 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 ZNF519Q8TB69 540 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 OIT3Q8WWZ8 545 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 ALKBH3Q96Q83 286 aaPredicted RBP10.16□□□□□ -0.78
CLDN4-202ENST00000431918 GSKIPQ9P0R6 139 aa10.16□□□□□ -0.78
CLDN4-202ENST00000431918 CCSO14618 274 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 RAMP1O60894 148 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 FABP1P07148 127 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 MFAP5Q13361 173 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 Q3ZCU0 254 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 OR52W1Q6IF63 320 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 ANKRD16Q6P6B7 361 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 OR4D10Q8NGI6 311 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 LINC00052Q96N35 136 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 TMEM59Q9BXS4 323 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 OR51B6Q9H340 312 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 CHMP1AQ9HD42 196 aaPredicted RBP10.15□□□□□ -0.78
CLDN4-202ENST00000431918 LOC101059948A0A1B0GTJ6 334 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 A0A1B0GW55 424 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 SPDEFO95238 335 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 PMP2P02689 132 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 DUX4L2P0CJ85 424 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 DUX4L3P0CJ86 424 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 DUX4L4P0CJ87 422 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 DUX4L5P0CJ88 424 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 DUX4L6P0CJ89 424 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 DUX4L7P0CJ90 424 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 SELENOPP49908 381 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 TRILQ7L0X0 811 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 OR2M3Q8NG83 312 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 LIPHQ8WWY8 451 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 SLC39A7Q92504 469 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 CLDN23Q96B33 292 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 SGK3Q96BR1 496 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 FOXRED1Q96CU9 486 aaPredicted RBP10.15□□□□□ -0.78
CLDN4-202ENST00000431918 THOC3Q96J01 351 aaKnown RBP10.15□□□□□ -0.78
CLDN4-202ENST00000431918 GSX2Q9BZM3 304 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 LDAHQ9H6V9 325 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 SDHAF2Q9NX18 166 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 DUX4Q9UBX2 424 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 OR2M5A3KFT3 312 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 FAM166BA8MTA8 275 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 LGALS8O00214 317 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 FARS2O95363 451 aaKnown RBP10.15□□□□□ -0.78
CLDN4-202ENST00000431918 ABHD16AO95870 558 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 PATE4P0C8F1 98 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 FCGR2AP12318 317 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 MEOX2P50222 304 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 RIN1Q13671 783 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 WIPI1Q5MNZ9 446 aaPredicted RBP10.15□□□□□ -0.78
CLDN4-202ENST00000431918 LRRTM1Q86UE6 522 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 FJX1Q86VR8 437 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 CATSPERDQ86XM0 798 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 C12orf45Q8N5I9 185 aaPredicted RBP10.15□□□□□ -0.78
CLDN4-202ENST00000431918 MAFIPQ8WZ33 124 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 PIGQQ9BRB3 760 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 POFUT1Q9H488 388 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 METTL8Q9H825 291 aaKnown RBP10.15□□□□□ -0.78
CLDN4-202ENST00000431918 NIT2Q9NQR4 276 aa10.15□□□□□ -0.78
CLDN4-202ENST00000431918 TMEM265A0A087WTH1 108 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 H7C417 338 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 LPLP06858 475 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 GAAP10253 952 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 TMEM255AQ5JRV8 349 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 RAB12Q6IQ22 244 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 NHLRC1Q6VVB1 395 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 NLRC3Q7RTR2 1065 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 CLRN3Q8NCR9 226 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 CSNK2A3Q8NEV1 391 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 SPTSSAQ969W0 71 aa10.14□□□□□ -0.79
CLDN4-202ENST00000431918 SCMH1Q96GD3 660 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms