RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 KIFAP3Q92845 792 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 BTN2A3PQ96KV6 586 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 RNF145Q96MT1 663 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 PKMYT1Q99640 499 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 SLC29A1Q99808 456 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 CCDC59Q9P031 241 aaKnown RBP0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 COX16Q9P0S2 106 aa0.84□□□□□ -2.27
RNU6-541P-201ENST00000384709 FBN3Q75N90 2809 aa0.84□□□□□ -2.28
RNU6-541P-201ENST00000384709 RPRD2Q5VT52 1461 aaKnown RBP0.84□□□□□ -2.28
RNU6-541P-201ENST00000384709 PCDH11XQ9BZA7 1347 aa0.84□□□□□ -2.28
RNU6-541P-201ENST00000384709 GOLGA6L4A6NEF3 574 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR6C70A6NIJ9 312 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 MFNGO00587 321 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 PLPP1O14494 284 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 CLOCKO15516 846 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 IGLV2-8P01709 118 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 IGLV7-43P04211 117 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 PFN1P07737 140 aaKnown RBP0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 ACSM4P0C7M7 580 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 NCF2P19878 526 aaPredicted RBP0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 HTR1DP28221 377 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 GALR1P47211 349 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 RAB10P61026 200 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 BAMBIQ13145 260 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 DDX39BQ13838 428 aaKnown RBP0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 ZMYND11Q15326 602 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 SLC25A35Q3KQZ1 300 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 C9orf135Q5VTT2 229 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 C22orf42Q6IC83 251 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 REEP3Q6NUK4 255 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 DEGS2Q6QHC5 323 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 TBPL2Q6SJ96 375 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 RGS9BPQ6ZS82 235 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 LINC00336Q6ZUF6 198 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 TCF24Q7RTU0 167 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 ERO1BQ86YB8 467 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 STK40Q8N2I9 435 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 C19orf18Q8NEA5 215 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR56B2PQ8NGI1 322 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR5B3Q8NH48 314 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 LRRC29Q8WV35 223 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 N4BP2L2Q92802 583 aaPredicted RBP0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 NRBF2Q96F24 287 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 GCOM2Q9BZD3 368 aaPredicted RBP0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 PKIBQ9C010 78 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 METTL7AQ9H8H3 244 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 CSNK1G1Q9HCP0 422 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 TAS2R1Q9NYW7 299 aa0.83□□□□□ -2.28
RNU6-541P-201ENST00000384709 SETD1AO15047 1707 aaKnown RBP0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 CEACAM18A8MTB9 384 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 H0Y8G0 127 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 H7C1H1 209 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 CPLX1O14810 134 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 AIM2O14862 343 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 RDH16O75452 317 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 FLOT1O75955 427 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 HPRT1P00492 218 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 SERPINA3P01011 423 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 MT-ND4P03905 459 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 TNNI1P19237 187 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 OTX1P32242 354 aaPredicted RBP0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 TAGLN2P37802 199 aaKnown RBP0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 SULT1E1P49888 294 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 DGCR6Q14129 220 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 IHHQ14623 411 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 NCF4Q15080 339 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 KRTAP13-4Q3LI77 160 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 HSDL1Q3SXM5 330 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 SP6Q3SY56 376 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 CEP55Q53EZ4 464 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 SLC8B1Q6J4K2 584 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 SPNS3Q6ZMD2 512 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 MBOAT1Q6ZNC8 495 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 CMC1Q7Z7K0 106 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 GTPBP8Q8N3Z3 284 aaPredicted RBP0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 CSGALNACT2Q8N6G5 542 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR1J4Q8NGS1 313 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR52N1Q8NH53 320 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 NUBPLQ8TB37 319 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 CPNE4Q96A23 557 aaPredicted RBP0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 EEF1AKMT3Q96AZ1 226 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 TGS1Q96RS0 853 aaKnown RBP0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 TMEM243Q9BU79 118 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 SLC17A4Q9Y2C5 497 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 YARS2Q9Y2Z4 477 aaKnown RBP0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 VWDEQ8N2E2 1590 aa0.82□□□□□ -2.28
RNU6-541P-201ENST00000384709 SMIM26A0A096LP01 95 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 ZNF878C9JN71 531 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 NDUFC2-KCTD14E9PQ53 114 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 PRAMEF26H0Y7S4 382 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 MANBAO00462 879 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 CDC40O60508 579 aaKnown RBP eCLIP0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 RAD1O60671 282 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 ANXA5P08758 320 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 CD37P11049 281 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 ZNF24P17028 368 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 PBLDP30039 288 aaPredicted RBP0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR1E1P30953 314 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 RRM2P31350 389 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 CD70P32970 193 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms