RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 REEP6Q96HR9 211 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF416Q9BWM5 594 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 AUNIPQ9H7T9 357 aa12.96□□□□□ -0.34
TCOF1-202ENST00000377797 BET1O15155 118 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 EPPINO95925 133 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 NRASP01111 189 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 RAC2P15153 192 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 MFFQ9GZY8 342 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 TNFSF4P23510 183 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 VRK1Q99986 396 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-202ENST00000377797 HOXB5P09067 269 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 MLF1P58340 268 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 TMPRSS7Q7RTY8 843 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 ANKRD33BA6NCL7 494 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 PMP2P02689 132 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 SERPINE2P07093 398 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 RAP2BP61225 183 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 KCNJ8Q15842 424 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-202ENST00000377797 EXD3Q8N9H8 876 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 SLC7A6Q92536 515 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 WDFY2Q96P53 400 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 SLC25A21Q9BQT8 299 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-202ENST00000377797 SEC22CQ9BRL7 303 aa12.95□□□□□ -0.34
TCOF1-202ENST00000377797 PRRG2O14669 202 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 FADS1O60427 444 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 ASAH2BP0C7U1 165 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 SCPEP1Q9HB40 452 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 LNP1A1A4G5 178 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 OGG1O15527 345 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 NXPH2O95156 264 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 LIFP15018 202 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 ARF1P84077 181 aaKnown RBP12.94□□□□□ -0.34
TCOF1-202ENST00000377797 FAAP20Q6NZ36 180 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 OR1F12Q8NHA8 337 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 FNDC9Q8TBE3 224 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 NUDCD2Q8WVJ2 157 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 KLK11Q9UBX7 282 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 PLEKHB1Q9UF11 243 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-202ENST00000377797 OR5H15A6NDH6 313 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF891A8MT65 544 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-202ENST00000377797 XRCC2O43543 280 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 PLPPR5Q32ZL2 321 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF695Q8IW36 515 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 SLC38A9Q8NBW4 561 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 ZC3H10Q96K80 434 aaKnown RBP12.94□□□□□ -0.34
TCOF1-202ENST00000377797 UCN2Q96RP3 112 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 BCO1Q9HAY6 547 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 BORCS7-ASMTA0A0B4J1R7 106 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 WNT11O96014 354 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 GCNT2Q8N0V5 402 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 ZFAND1Q8TCF1 268 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 ADAM19Q9H013 955 aa12.94□□□□□ -0.34
TCOF1-202ENST00000377797 AKIRIN1Q9H9L7 192 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-202ENST00000377797 FABP7O15540 132 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 SEMA7AO75326 666 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 BTG1P62324 171 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 TAF9Q16594 264 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 CDC20BQ86Y33 519 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 FAM131CQ96AQ9 280 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 NPAP1Q9NZP6 1156 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 LSM5Q9Y4Y9 91 aaKnown RBP12.93□□□□□ -0.34
TCOF1-202ENST00000377797 DNAJC13O75165 2243 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 IGHV3-64DA0A0J9YX35 117 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 GRPP07492 148 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 EDN3P14138 238 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF32P17041 273 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 IL2RGP31785 369 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 HTR2BP41595 481 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 STPG1Q5TH74 334 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF574Q6ZN55 896 aaPredicted RBP12.93□□□□□ -0.34
TCOF1-202ENST00000377797 SMIM4Q8WVI0 70 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 PMS2P1A4D2B8 440 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 C17orf51A8MQB3 221 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 PATE4P0C8F1 98 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 RAB1AP62820 205 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 ACSM1Q08AH1 577 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 RBM39Q14498 530 aaKnown RBP12.93□□□□□ -0.34
TCOF1-202ENST00000377797 FJX1Q86VR8 437 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 GPR160Q9UJ42 338 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 SSTR2P30874 369 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 SEC22AQ96IW7 307 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 TRAPPC2LQ9UL33 140 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 PROCRQ9UNN8 238 aa12.93□□□□□ -0.34
TCOF1-202ENST00000377797 A0A0A6YYH2 397 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 A6NJ64 397 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 FAM157BP0CG42 384 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 GABRA2P47869 451 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF133P52736 654 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-202ENST00000377797 TRILQ7L0X0 811 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 FRRS1LQ9P0K9 344 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 TMEM127O75204 238 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms