RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PRKACAP17612 351 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 OMGP23515 440 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 ISXQ2M1V0 245 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 AADACL3Q5VUY0 350 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 WDR5BQ86VZ2 330 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 C20orf85Q9H1P6 137 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 MOB1AQ9H8S9 216 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 BCO1Q9HAY6 547 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 BHLHE40O14503 412 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 SULT1B1O43704 296 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 GNB3P16520 340 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 DCTDP32321 178 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 FJX1Q86VR8 437 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 WFDC8Q8IUA0 241 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 OCSTAMPQ9BR26 566 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 EXOSC3Q9NQT5 275 aaKnown RBP16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 PILRBQ9UKJ0 227 aa16.08■□□□□ 0.16
PTPDC1-202ENST00000375360 SSX5O60225 188 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 WNT11O96014 354 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 ALOX5APP20292 161 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 PDCD1Q15116 288 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 OR8B8Q15620 311 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 C4orf45Q96LM5 186 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 RBM38Q9H0Z9 239 aaKnown RBP16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 SPINK2P20155 84 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 RAP2BP61225 183 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 WDR88Q6ZMY6 472 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 EGFL6Q8IUX8 553 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 A0A0G2JMZ2 1700 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 CCSO14618 274 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 FBXO24O75426 580 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 CCL2P13500 99 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 EMP3P54852 163 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 ZNF416Q9BWM5 594 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 SLCO5A1Q9H2Y9 848 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 CHD5Q8TDI0 1954 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 CD3DP04234 171 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 HAAOP46952 286 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 CAMLGP49069 296 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 ERVK-16P61578 105 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 TGIF1Q15583 401 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 OR8G1Q15617 311 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 SCARF2Q96GP6 870 aaPredicted RBP16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 UCN2Q96RP3 112 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 PTDSS2Q9BVG9 487 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 COPS3Q9UNS2 423 aa16.07■□□□□ 0.16
PTPDC1-202ENST00000375360 PCNX1Q96RV3 2341 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 OR6C65A6NJZ3 312 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 LPLP06858 475 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 HLA-DOBP13765 273 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 ZNF32P17041 273 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 SRD5A2P31213 254 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 PLGLAQ15195 96 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 POU4F3Q15319 338 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 ZNF774Q6NX45 483 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 NPEPL1Q8NDH3 523 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 AKIP1Q9NQ31 210 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 DEGS1O15121 323 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 ZNF728P0DKX0 622 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 MESTQ5EB52 335 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 OR5H15A6NDH6 313 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 PLPP2O43688 288 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 RFX2P48378 723 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 GUCA2AQ02747 115 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 MED18Q9BUE0 208 aa16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 SPRY1O43609 319 aaPredicted RBP16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 FGF9P31371 208 aaPredicted RBP16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 TSNAXQ99598 290 aaKnown RBP16.06■□□□□ 0.16
PTPDC1-202ENST00000375360 TRIM64A6NGJ6 449 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 EPPINO95925 133 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 ARR3P36575 388 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 SLC22A25Q6T423 547 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 SUMF1Q8NBK3 374 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 OR11L1Q8NGX0 322 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 SRRQ9GZT4 340 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 OR6C6A6NF89 314 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 DND1Q8IYX4 353 aaKnown RBP16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 NELFAQ9H3P2 528 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 M0R1B8 84 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 TSPAN9O75954 239 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 ACTBL2Q562R1 376 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 ALKAL2Q6UX46 152 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 ZNF610Q8N9Z0 462 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 OR4D6Q8NGJ1 314 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 H1FXQ92522 213 aaKnown RBP16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 BARHL1Q9BZE3 327 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 ASF1BQ9NVP2 202 aa16.05■□□□□ 0.16
PTPDC1-202ENST00000375360 C17orf51A8MQB3 221 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 PHF1O43189 567 aaPredicted RBP16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 ATG12O94817 140 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 OR1F12Q8NHA8 337 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 SLC25A21Q9BQT8 299 aaPredicted RBP16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 MLXQ9UH92 298 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 MEX3AA1L020 520 aaKnown RBP16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 SNAPC5O75971 98 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 PTAFRP25105 342 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 NFYBP25208 207 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 MAGEA5P43359 124 aa16.04■□□□□ 0.16
PTPDC1-202ENST00000375360 SOX8P57073 446 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms