RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 RTL10Q7L3V2 364 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 CHST4Q8NCG5 386 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ERGIC1Q969X5 290 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TMEM230Q96A57 120 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 CCNL2Q96S94 520 aaPredicted RBP11.85□□□□□ -0.51
IFT88-202ENST00000351808 SDF2Q99470 211 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 OR11A1Q9GZK7 315 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 SEMA5BQ9P283 1151 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ADAM29Q9UKF5 820 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 PADI1Q9ULC6 663 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 C4orf51C9J302 202 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TCF21O43680 179 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ERVFC1-1P60608 527 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ENPP2Q13822 863 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TMEM183AQ8IXX5 376 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 CSNK1A1LQ8N752 337 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 PLPP5Q8NEB5 264 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 NEK7Q8TDX7 302 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 PPP1R14AQ96A00 147 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 FLRT3Q9NZU0 649 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 GTF2A1LQ9UNN4 478 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 A0A087WWC5 75 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 DUXAA6NLW8 204 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TMEM212A6NML5 194 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TP53I11O14683 189 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TGOLN2O43493 480 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 SFT2D2O95562 160 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 PCCBP05166 539 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 RABIFP47224 123 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 PPM1FP49593 454 aaPredicted RBP11.85□□□□□ -0.51
IFT88-202ENST00000351808 TAS2R31P59538 309 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TRA2BP62995 288 aaKnown RBP11.85□□□□□ -0.51
IFT88-202ENST00000351808 PAX5Q02548 391 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 NFATC4Q14934 902 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 RAB35Q15286 201 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 AADACL3Q5VUY0 350 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 MFSD12Q6NUT3 480 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ZNF774Q6NX45 483 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 OPN5Q6U736 354 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
IFT88-202ENST00000351808 OR51B6Q9H340 312 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 C5orf66Q9H5L9 145 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 MTCH2Q9Y6C9 303 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
IFT88-202ENST00000351808 DNAJB6O75190 326 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 CRTAPO75718 401 aaPredicted RBP11.84□□□□□ -0.51
IFT88-202ENST00000351808 FOSL2P15408 326 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 IL15RAQ13261 267 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 HIKESHIQ53FT3 197 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 OTPQ5XKR4 325 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 FAAP24Q9BTP7 215 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 NUDT9Q9BW91 350 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 FOXD3Q9UJU5 478 aaPredicted RBP11.84□□□□□ -0.51
IFT88-202ENST00000351808 A0A1B0GWA3 101 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 HSD17B6O14756 317 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 DDNO94850 711 aaPredicted RBP11.84□□□□□ -0.51
IFT88-202ENST00000351808 CFPP27918 469 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 AKT2P31751 481 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 GLIPR1P48060 266 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 RAC1P63000 192 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 DMWDQ09019 674 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
IFT88-202ENST00000351808 HOGA1Q86XE5 327 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 SYT3Q9BQG1 590 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 NMNAT2Q9BZQ4 307 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 SH3BGRL3Q9H299 93 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 SRA1Q9HD15 236 aaKnown RBP11.84□□□□□ -0.51
IFT88-202ENST00000351808 SCN3AQ9NY46 2000 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 SUSD2Q9UGT4 822 aa11.84□□□□□ -0.51
IFT88-202ENST00000351808 TLCD2A6NGC4 264 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 CDRT15L2A8MXV6 281 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 CXCL11O14625 94 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 GRM6O15303 877 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 ERI3O43414 337 aaKnown RBP11.83□□□□□ -0.52
IFT88-202ENST00000351808 GCGP01275 180 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
IFT88-202ENST00000351808 CCL20P78556 96 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 ARHGAP11BQ3KRB8 267 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 POM121L1PQ3SYA9 428 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 ZNF658BQ4V348 819 aaPredicted RBP11.83□□□□□ -0.52
IFT88-202ENST00000351808 WDR38Q5JTN6 314 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 C22orf39Q6P5X5 142 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 ZNF429Q86V71 674 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 RCBTB1Q8NDN9 531 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 ZNF461Q8TAF7 563 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 AQP3Q92482 292 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 ANKRD9Q96BM1 317 aaPredicted RBP11.83□□□□□ -0.52
IFT88-202ENST00000351808 SLC22A12Q96S37 553 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 OR2AG1Q9H205 316 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 PLEKHA2Q9HB19 425 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 CES1P1Q9UKY3 287 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 SLC22A13Q9Y226 551 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
IFT88-202ENST00000351808 MRPS23Q9Y3D9 190 aaKnown RBP11.83□□□□□ -0.52
IFT88-202ENST00000351808 ENTPD2Q9Y5L3 495 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 SCN2AQ99250 2005 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 DHRS7CA6NNS2 312 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 NID1P14543 1247 aa11.83□□□□□ -0.52
IFT88-202ENST00000351808 CDKN2AP42771 156 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms