RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 BAIAP2Q9UQB8 552 aa16.36■□□□□ 0.21
LIME1-201ENST00000309546 PPIAL4AQ9Y536 164 aa16.36■□□□□ 0.21
LIME1-201ENST00000309546 N6AMT1Q9Y5N5 214 aa16.36■□□□□ 0.21
LIME1-201ENST00000309546 GGT3PA6NGU5 568 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 WNT2P09544 360 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 CLUP10909 449 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 SLC2A1P11166 492 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 SPI1P17947 270 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 CA6P23280 308 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 ANOS1P23352 680 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 FMO3P31513 532 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 PMELP40967 661 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 PRKXP51817 358 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 ZNF92Q03936 586 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 MICAQ29983 383 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 ZNF181Q2M3W8 571 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 ZNF404Q494X3 552 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 SPATC1Q76KD6 591 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 C19orf18Q8NEA5 215 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 OR10G2Q8NGC3 310 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 OR11L1Q8NGX0 322 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 SLAMF6Q96DU3 332 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 NEIL1Q96FI4 390 aaPredicted RBP16.35■□□□□ 0.21
LIME1-201ENST00000309546 TMEM246Q9BRR3 403 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 ADAT1Q9BUB4 502 aaKnown RBP16.35■□□□□ 0.21
LIME1-201ENST00000309546 ESM1Q9NQ30 184 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 MIOXQ9UGB7 285 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 NUP50Q9UKX7 468 aa16.35■□□□□ 0.21
LIME1-201ENST00000309546 A0A1B0GWJ7 208 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 C5orf63A6NC05 138 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 CD300LBA8K4G0 201 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 FAM20BO75063 409 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 IFNGP01579 166 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 CFPP27918 469 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 CD200P41217 278 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 GATA4P43694 442 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 GLYATL3Q5SZD4 288 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 DRAM2Q6UX65 266 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 BTNL3Q6UXE8 466 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 RBMS3Q6XE24 437 aaKnown RBP16.34■□□□□ 0.21
LIME1-201ENST00000309546 NLRC3Q7RTR2 1065 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 SIGLECL1Q8N7X8 197 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 ZDHHC22Q8N966 263 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 OR8B3Q8NGG8 313 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 DVL3Q92997 716 aaPredicted RBP16.34■□□□□ 0.21
LIME1-201ENST00000309546 OTULINQ96BN8 352 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 PLEKHA8Q96JA3 519 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 CLPTM1LQ96KA5 538 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 OR8B2Q96RD0 313 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 DGCR6LQ9BY27 220 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 ZNF69Q9UC07 566 aa16.34■□□□□ 0.21
LIME1-201ENST00000309546 PRPF19Q9UMS4 504 aaKnown RBP16.34■□□□□ 0.21
LIME1-201ENST00000309546 RIIAD1A6NNX1 92 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 ZNF593O00488 134 aaPredicted RBP16.33■□□□□ 0.2
LIME1-201ENST00000309546 FAM107AO95990 144 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 ZNF3P17036 446 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 OTX1P32242 354 aaPredicted RBP16.33■□□□□ 0.2
LIME1-201ENST00000309546 SLC25A1P53007 311 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 MPPED2Q15777 294 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 KLF17Q5JT82 389 aaPredicted RBP16.33■□□□□ 0.2
LIME1-201ENST00000309546 IQCF1Q8N6M8 205 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 CELF2-AS1Q8N7Q2 184 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 BOLLQ8N9W6 283 aaKnown RBP16.33■□□□□ 0.2
LIME1-201ENST00000309546 TEX47Q8TBZ9 253 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 ASB9Q96DX5 294 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 KCNJ15Q99712 375 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 NIPSNAP1Q9BPW8 284 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 NTN4Q9HB63 628 aa16.33■□□□□ 0.2
LIME1-201ENST00000309546 NOP16Q9Y3C1 178 aaKnown RBP16.33■□□□□ 0.2
LIME1-201ENST00000309546 IGHV3OR16-10A0A075B7F0 116 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 ZNF878C9JN71 531 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 H3BN98 237 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 TBX1O43435 398 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 RAP2AP10114 183 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 PITPNBP48739 271 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 UBA52P62987 128 aaKnown RBP16.32■□□□□ 0.2
LIME1-201ENST00000309546 HOXA4Q00056 320 aaPredicted RBP16.32■□□□□ 0.2
LIME1-201ENST00000309546 LYPD2Q6UXB3 125 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 BCL6BQ8N143 479 aaPredicted RBP16.32■□□□□ 0.2
LIME1-201ENST00000309546 Q8TCH9 128 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 ERGIC1Q969X5 290 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 NMNAT2Q9BZQ4 307 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 SLC22A4Q9H015 551 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 MED20Q9H944 212 aa16.32■□□□□ 0.2
LIME1-201ENST00000309546 IGHV2-70DA0A0C4DH43 119 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 TMEM89A2RUT3 159 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 FAM183AA6NL82 134 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 CST1P01037 141 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 T-ENOLP0DO92 83 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 CPT2P23786 658 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 CD80P33681 288 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 PAX8Q06710 450 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 EIF2B1Q14232 305 aaKnown RBP16.31■□□□□ 0.2
LIME1-201ENST00000309546 LRRN1Q6UXK5 716 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 DCDC5Q6ZRR9 648 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 ERI1Q8IV48 349 aaKnown RBP16.31■□□□□ 0.2
LIME1-201ENST00000309546 C3orf56Q8N813 242 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 OR56B2PQ8NGI1 322 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 OR6N2Q8NGY6 317 aa16.31■□□□□ 0.2
LIME1-201ENST00000309546 GIPC3Q8TF64 312 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms