RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 RBM38Q9H0Z9 239 aaKnown RBP8.24□□□□□ -1.09
TPM1-225ENST00000560679 TMEM165Q9HC07 324 aa8.24□□□□□ -1.09
TPM1-225ENST00000560679 GCM1Q9NP62 436 aa8.24□□□□□ -1.09
TPM1-225ENST00000560679 ANGPT4Q9Y264 503 aa8.24□□□□□ -1.09
TPM1-225ENST00000560679 DOCK11Q5JSL3 2073 aa8.24□□□□□ -1.09
TPM1-225ENST00000560679 NOTCH3Q9UM47 2321 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 TMEM247A6NEH6 219 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 RNF13O43567 381 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 LYPD3O95274 346 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 CLIC3O95833 236 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 CH25HO95992 272 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 IFNA14P01570 189 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 THY1P04216 161 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 MMP9P14780 707 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 TNFRSF1AP19438 455 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 GDI2P50395 445 aaKnown RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 ZNF84P51523 738 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 CRYBA2P53672 197 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 PCBP3P57721 371 aaKnown RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 RGS8P57771 180 aaPredicted RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 CLRN1P58418 232 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 ERVK-25P63136 954 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 MRPS34P82930 218 aaKnown RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 CDK6Q00534 326 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 FMODQ06828 376 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 IL18R1Q13478 541 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 IFI44LQ53G44 452 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 REC114Q7Z4M0 266 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 THAP5Q7Z6K1 395 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 TSPYL5Q86VY4 417 aaPredicted RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 LDLRAD3Q86YD5 345 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 C1orf174Q8IYL3 243 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 ZSCAN4Q8NAM6 433 aaPredicted RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 ZNF420Q8TAQ5 688 aaPredicted RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 ASB10Q8WXI3 467 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 TAMM41Q96BW9 452 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 NEIL1Q96FI4 390 aaPredicted RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 TPD52L3Q96J77 140 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 C7orf34Q96L11 122 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 TBX15Q96SF7 602 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 ZNF607Q96SK3 696 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 TMEM246Q9BRR3 403 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 SLC19A3Q9BZV2 496 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 REEP1Q9H902 201 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 SIAEQ9HAT2 523 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 TMEM27Q9HBJ8 222 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 CCNB1IP1Q9NPC3 277 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.23□□□□□ -1.09
TPM1-225ENST00000560679 FAM118AQ9NWS6 357 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 THUMPD1Q9NXG2 353 aaKnown RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 SELENONQ9NZV5 590 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 EIF3KQ9UBQ5 218 aaKnown RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 IL19Q9UHD0 177 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 SAMHD1Q9Y3Z3 626 aaKnown RBP8.23□□□□□ -1.09
TPM1-225ENST00000560679 COMMD3-BMI1R4GMX3 469 aa8.23□□□□□ -1.09
TPM1-225ENST00000560679 CENPVL3A0A0U1RRI6 287 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 SLC16A6O15403 523 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 AHCYL1O43865 530 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 PIP5K1CO60331 668 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 TRMUO75648 421 aaKnown RBP8.22□□□□□ -1.09
TPM1-225ENST00000560679 OR6A2O95222 327 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 CYB5R3P00387 301 aaPredicted RBP8.22□□□□□ -1.09
TPM1-225ENST00000560679 ASAH2BP0C7U1 165 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 KITLGP21583 273 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 TNFSF4P23510 183 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 CPT2P23786 658 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 AQP1P29972 269 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 CFHR2P36980 270 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 PITPNBP48739 271 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 RPS6KA3P51812 740 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 ARHGDIAP52565 204 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 BPIFB3P59826 476 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 PPP1R8Q12972 351 aaKnown RBP8.22□□□□□ -1.09
TPM1-225ENST00000560679 NPTX1Q15818 432 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 ZNF404Q494X3 552 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 RBM48Q5RL73 367 aaKnown RBP8.22□□□□□ -1.09
TPM1-225ENST00000560679 VAX1Q5SQQ9 334 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 FAM201AQ5SY85 155 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 C11orf87Q6NUJ2 197 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 SLC27A4Q6P1M0 643 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 ZNF841Q6ZN19 808 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 LZICQ8WZA0 190 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 HDAC2Q92769 488 aaKnown RBP8.22□□□□□ -1.09
TPM1-225ENST00000560679 DGCR14Q96DF8 476 aaKnown RBP8.22□□□□□ -1.09
TPM1-225ENST00000560679 PCGF1Q9BSM1 259 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 OR2H1Q9GZK4 316 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 C16orf95Q9H693 158 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 AURKAIP1Q9NWT8 199 aaPredicted RBP8.22□□□□□ -1.09
TPM1-225ENST00000560679 PTTG2Q9NZH5 202 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 MIOXQ9UGB7 285 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 ZNF229Q9UJW7 825 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 RYR2Q92736 4967 aa8.22□□□□□ -1.09
TPM1-225ENST00000560679 SACSQ9NZJ4 4579 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 A0A0U1RQK1 487 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 C5orf58C9J3I9 102 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 M0R3H8 397 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 KPNA4O00629 521 aaPredicted RBP8.21□□□□□ -1.1
TPM1-225ENST00000560679 CHP2O43745 196 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 DIRAS1O95057 198 aa8.21□□□□□ -1.1
TPM1-225ENST00000560679 OPN1SWP03999 348 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms