RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 MLLT11Q13015 90 aaPredicted RBP5.76□□□□□ -1.49
SMCO1-201ENST00000397537 LAGE3Q14657 143 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 MARC1Q5VT66 337 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 FAHD2BQ6P2I3 314 aaPredicted RBP5.76□□□□□ -1.49
SMCO1-201ENST00000397537 DNM1P34Q6PK57 102 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 LRRN1Q6UXK5 716 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 MRGPREQ86SM8 312 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 DND1Q8IYX4 353 aaKnown RBP5.76□□□□□ -1.49
SMCO1-201ENST00000397537 OR2AE1Q8NHA4 323 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 ZPLD1Q8TCW7 415 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 FAHD2AQ96GK7 314 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 FAIM2Q9BWQ8 316 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 SPNS1Q9H2V7 528 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 C3orf14Q9HBI5 128 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 PARD6AQ9NPB6 346 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 ABCC13Q9NSE7 274 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 IMPAD1Q9NX62 359 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 TEX10Q9NXF1 929 aaPredicted RBP5.76□□□□□ -1.49
SMCO1-201ENST00000397537 OR2W1Q9Y3N9 320 aa5.76□□□□□ -1.49
SMCO1-201ENST00000397537 NAV1Q8NEY1 1877 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 LRRC37A2A6NM11 1700 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ACACBO00763 2458 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 SIPA1L3O60292 1781 aaPredicted RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 TRAV8-7A0A075B6U6 113 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 A0A087WZ39 114 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 EFCAB7A8K855 629 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 PP2D1A8MPX8 630 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 C9J4A7 227 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 FTCDNL1E5RQL4 147 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 GFYI3L273 518 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 CDC7O00311 574 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 MSTNO14793 375 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 SLC31A1O15431 190 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ENSAO43768 121 aaKnown RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 TDP2O95551 362 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 SERPINA1P01009 418 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 HOXD4P09016 255 aaPredicted RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 RANP62826 216 aaKnown RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 POU3F1Q03052 451 aaPredicted RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 RIGQ13278 110 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 EIF4EBP2Q13542 120 aaPredicted RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF234Q14588 700 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF169Q14929 603 aaPredicted RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ARL6IP1Q15041 203 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ACSM3Q53FZ2 586 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 GDPD3Q7L5L3 318 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 LACC1Q8IV20 430 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 STPG2Q8N412 459 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 GVQW1Q8N7I0 195 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 TCEANCQ8N8B7 351 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ATP6V1C2Q8NEY4 427 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 OR9Q2Q8NGE9 314 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ITFG1Q8TB96 612 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 SLC7A13Q8TCU3 470 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 RTP4Q96DX8 246 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 MYEOVQ96EZ4 313 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 FAM210BQ96KR6 192 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 OXGR1Q96P68 337 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 LPAR4Q99677 370 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF2Q9BSG1 426 aaPredicted RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 HCAR1Q9BXC0 346 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF334Q9HCZ1 680 aaPredicted RBP5.75□□□□□ -1.49
SMCO1-201ENST00000397537 TP53TG5Q9Y2B4 290 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 MTCH2Q9Y6C9 303 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 ARID2Q68CP9 1835 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 MAST2Q6P0Q8 1798 aa5.75□□□□□ -1.49
SMCO1-201ENST00000397537 IGHV2-70DA0A0C4DH43 119 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.74□□□□□ -1.49
SMCO1-201ENST00000397537 A0A1B0GW55 424 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.74□□□□□ -1.49
SMCO1-201ENST00000397537 LINC00862A6NCI5 91 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 NEDD8-MDP1E9PL57 170 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 F5H768 121 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 H3BNH8 94 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 ACOT8O14734 319 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 CXCL13O43927 109 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 UGT2B17O75795 530 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 TRAPPC6AO75865 159 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 SRP72O76094 671 aaKnown RBP5.74□□□□□ -1.49
SMCO1-201ENST00000397537 HPP00738 406 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 KLK3P07288 261 aaPredicted RBP5.74□□□□□ -1.49
SMCO1-201ENST00000397537 DUX4L2P0CJ85 424 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 DUX4L3P0CJ86 424 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 DUX4L4P0CJ87 422 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 DUX4L5P0CJ88 424 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 DUX4L6P0CJ89 424 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 DUX4L7P0CJ90 424 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 ARR3P36575 388 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 RFC3P40938 356 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 TMEM33P57088 247 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 OR10A3P58181 314 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 RHOAP61586 193 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 GAGE1Q13065 139 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 RAB31Q13636 194 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 RAB35Q15286 201 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 ZNF658BQ4V348 819 aaPredicted RBP5.74□□□□□ -1.49
SMCO1-201ENST00000397537 UBE2UQ5VVX9 321 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 NANOGP8Q6NSW7 305 aa5.74□□□□□ -1.49
SMCO1-201ENST00000397537 DUX4L9Q6RFH8 374 aaPredicted RBP5.74□□□□□ -1.49
SMCO1-201ENST00000397537 Q6ZSV7 163 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms