RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 ZNF317Q96PQ6 595 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.2-201ENST00000390847 RSG1Q9BU20 258 aa2.38□□□□□ -2.03
SNORA40.2-201ENST00000390847 TMEM38AQ9H6F2 299 aa2.38□□□□□ -2.03
SNORA40.2-201ENST00000390847 TMEM27Q9HBJ8 222 aa2.38□□□□□ -2.03
SNORA40.2-201ENST00000390847 MYOZ1Q9NP98 299 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.2-201ENST00000390847 MED4Q9NPJ6 270 aa2.38□□□□□ -2.03
SNORA40.2-201ENST00000390847 S4R3C0 116 aa2.38□□□□□ -2.03
SNORA40.2-201ENST00000390847 CENPVL3A0A0U1RRI6 287 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 PLPP1O14494 284 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 SLC9A3R1O14745 358 aaPredicted RBP2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 CD74P04233 296 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 CELP19835 753 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 ME2P23368 584 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 BEX3Q00994 111 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 CYP24A1Q07973 514 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 CUL2Q13617 745 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 IDI1Q13907 227 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 KPRPQ5T749 579 aaPredicted RBP2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 C1orf185Q5T7R7 199 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 PRR9Q5T870 116 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 TWF2Q6IBS0 349 aaKnown RBP2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 GATSQ8NAP1 163 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 TTLQ8NG68 377 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 NRGNQ92686 78 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 NRBF2Q96F24 287 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 RBBP8Q99708 897 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 ZNF717Q9BY31 904 aaPredicted RBP2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 ZYG11BQ9C0D3 744 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 GEMIN7Q9H840 131 aaKnown RBP2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 MRM3Q9HC36 420 aaKnown RBP2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 CCNB1IP1Q9NPC3 277 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 RAB20Q9NX57 234 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 SLC39A1Q9NY26 324 aa2.37□□□□□ -2.03
SNORA40.2-201ENST00000390847 SMIM26A0A096LP01 95 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 IGHV1-69DA0A0B4J2H0 117 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 IGKV1-8A0A0C4DH67 115 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 A0A0J9YXV3 536 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 KRBOX1C9JBD0 128 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 AQP8O94778 261 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 HBE1P02100 147 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 ERCC1P07992 297 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 STOMP27105 288 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 TAS2R46P59540 309 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 HSDL1Q3SXM5 330 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 SPESP1Q6UW49 350 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 CBLN2Q8IUK8 224 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 GABRG1Q8N1C3 465 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 CCDC148Q8NFR7 591 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 C8orf44Q96CB5 159 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 RNF145Q96MT1 663 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 CDX2Q99626 313 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 GGTLC1Q9BX51 225 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 UCK2Q9BZX2 261 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 SLC7A5P2Q9GIP4 190 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 EXOSC4Q9NPD3 245 aaKnown RBP2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 C8orf17Q9NRJ1 99 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 UBN2Q6ZU65 1347 aa2.36□□□□□ -2.03
SNORA40.2-201ENST00000390847 PDZK1P1A8MUH7 402 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 K7EM74 188 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 EIF1BO60739 113 aaKnown RBP2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 EIF1P41567 113 aaKnown RBP2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 GFERP55789 205 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 ZNF616Q08AN1 781 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 NCF4Q15080 339 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 RNASE13Q5GAN3 156 aaKnown RBP2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 UNQ9165/PRO28630Q6UXU0 137 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 BZW1Q7L1Q6 419 aaKnown RBP2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 SCD5Q86SK9 330 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 OR1J4Q8NGS1 313 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 OR10G6Q8NH81 332 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 SLIRPQ9GZT3 109 aaKnown RBP2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 ACP6Q9NPH0 428 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 C20orf96Q9NUD7 363 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 SIGLEC9Q9Y336 463 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 WIF1Q9Y5W5 379 aa2.35□□□□□ -2.03
SNORA40.2-201ENST00000390847 A6NDN8 102 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 OR5H1A6NKK0 313 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 A8MUU9 505 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 TEX46H3BTG2 121 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 GABRPO00591 440 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 POLR1CO15160 346 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 CHMP2AO43633 222 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 NMT2O60551 498 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 PAHP00439 452 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 HPRT1P00492 218 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 IGHV3-11P01762 117 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 CLTAP09496 248 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 RAB4AP20338 218 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 LOXP28300 417 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 KRTAP10-1P60331 282 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 PPIDQ08752 370 aaKnown RBP2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 SSX9Q7RTT3 188 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 JAGN1Q8N5M9 183 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 PHF10Q8WUB8 498 aaKnown RBP2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 C17orf50Q8WW18 174 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 SLC17A7Q9P2U7 560 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 CBY1Q9Y3M2 126 aa2.34□□□□□ -2.03
SNORA40.2-201ENST00000390847 IGHV7-4-1A0A0J9YVY3 117 aa2.33□□□□□ -2.04
SNORA40.2-201ENST00000390847 KBTBD11-OT1A0A1B0GTJ5 212 aa2.33□□□□□ -2.04
SNORA40.2-201ENST00000390847 M0R3G1 203 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms