RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GPR84Q9NQS5 396 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 CACFD1Q9UGQ2 172 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 MYH7P12883 1935 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 FGF7P21781 194 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 DIO1P49895 249 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 CLEC9AQ6UXN8 241 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 LSRQ86X29 649 aaPredicted RBP13.54□□□□□ -0.24
LMX1B-201ENST00000355497 TMEM230Q96A57 120 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 TRIB1Q96RU8 372 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 S1PR5Q9H228 398 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 R4GMQ9 66 aa13.54□□□□□ -0.24
LMX1B-201ENST00000355497 A0A087WV62 115 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 ANKRD61A6NGH8 418 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 SMIM18P0DKX4 95 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 HRH1P35367 487 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 LYG2Q86SG7 212 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 ZBTB44Q8NCP5 570 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 DAPP1Q9UN19 280 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 MYH6P13533 1939 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 SLC25A4P12235 298 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 CNN1P51911 297 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 CLDN20P56880 219 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 UBE2MP61081 183 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 CTU2Q2VPK5 515 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF561Q8N587 486 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 PDXPQ96GD0 296 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 MYH10P35580 1976 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 MYH7BA7E2Y1 1941 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 SELENBP1Q13228 472 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 METRNLQ641Q3 311 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 OR2T2Q6IF00 324 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 OR10AD1Q8NGE0 317 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF768Q9H5H4 540 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 HINT3Q9NQE9 182 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 RCL1Q9Y2P8 373 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 BAZ2AQ9UIF9 1905 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 A0A1B0GUH1 482 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 NCBP2LA6PVI3 153 aaKnown RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 SNRPGP15A8MWD9 76 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 CST5P28325 142 aaPredicted RBP13.53□□□□□ -0.24
LMX1B-201ENST00000355497 DUSP8Q13202 625 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 FAAP20Q6NZ36 180 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 ZDHHC23Q8IYP9 409 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 GPR32P1Q8NGA4 272 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 KCNE4Q8WWG9 221 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 PBOV1Q9GZY1 135 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 MYH11P35749 1972 aa13.53□□□□□ -0.24
LMX1B-201ENST00000355497 A0A0B4J203 849 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 MGMTP16455 207 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 CALCRP30988 508 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 OXA1LQ15070 435 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 SIRT6Q8N6T7 355 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 FLVCR2Q9UPI3 526 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 FAM221AA4D161 298 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 M0QZ24 198 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 FBP1P09467 338 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 RNF212Q495C1 297 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 SYS1Q8N2H4 156 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 ASB13Q8WXK3 278 aa13.52□□□□□ -0.24
LMX1B-201ENST00000355497 ACSM4P0C7M7 580 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 NME1P15531 152 aaKnown RBP13.52□□□□□ -0.25
LMX1B-201ENST00000355497 ACSM5Q6NUN0 579 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 ANKRD16Q6P6B7 361 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 RELL2Q8NC24 303 aaPredicted RBP13.52□□□□□ -0.25
LMX1B-201ENST00000355497 PARD6AQ9NPB6 346 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 LAMP3Q9UQV4 416 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 CD22P20273 847 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 OPRM1P35372 400 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 DEFB108BQ8NET1 73 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 NUDCD2Q8WVJ2 157 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 ERGIC1Q969X5 290 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 OXGR1Q96P68 337 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 A0A1W2PPQ1 181 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 ZAR1LA6NP61 321 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 PRRG2O14669 202 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 NKAIN1Q4KMZ8 207 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 PAQR6Q6TCH4 344 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 BAP18Q8IXM2 172 aa13.52□□□□□ -0.25
LMX1B-201ENST00000355497 TNFRSF10CO14798 259 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 PIGPP57054 158 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 GDF2Q9UK05 429 aaPredicted RBP13.51□□□□□ -0.25
LMX1B-201ENST00000355497 TUBAL3A6NHL2 446 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 BCL2L11O43521 198 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 ZNF17P17021 662 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 SLC19A1P41440 591 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 NOVP48745 357 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 RPL18Q07020 188 aaKnown RBP13.51□□□□□ -0.25
LMX1B-201ENST00000355497 ZNF528Q3MIS6 628 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 SLC38A6Q8IZM9 456 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 EXD3Q8N9H8 876 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 MARCH1Q8TCQ1 289 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 IGHV3-64DA0A0J9YX35 117 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 ICOSLGO75144 302 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 PIAS2O75928 621 aa13.51□□□□□ -0.25
LMX1B-201ENST00000355497 CD3DP04234 171 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms