RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DCAF16Q9NXF7 216 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 VSX1Q9NZR4 365 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ADAM30Q9UKF2 790 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 UGT2A1Q9Y4X1 527 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SESN1Q9Y6P5 492 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ZZEF1O43149 2961 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TMED7-TICAM2A0A0A6YYA0 188 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 LOC105371267A0A1B0GV96 52 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 FUOMA2VDF0 154 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 EEF1E1-BLOC1S5C9J1V9 151 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 EEF1E1O43324 174 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 PTP4A3O75365 173 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RDH16O75452 317 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 REM1O75628 298 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TOX4O94842 621 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SNAPINO95295 136 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CALCAP01258 141 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 S100A6P06703 90 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ACADSP16219 412 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 COMTP21964 271 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CEACAM3P40198 252 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CEACAM6P40199 344 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SLC9A3P48764 834 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 DNASE1L1P49184 302 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SELENOPP49908 381 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ALDH18A1P54886 795 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 XGP55808 180 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TAS2R40P59535 323 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ACTR3P61158 418 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ABCE1P61221 599 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 PSG6Q00889 435 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CYP51A1Q16850 503 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TPD52L1Q16890 204 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SYT16Q17RD7 645 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MICBQ29980 383 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CCDC153Q494R4 210 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 PIK3CD-AS1Q5SR53 167 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 KDM4DQ6B0I6 523 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MED27Q6P2C8 311 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TEX38Q6PEX7 206 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 DCUN1D2Q6PH85 259 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 KLHL24Q6TFL4 600 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TMIGD1Q6UXZ0 262 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ASRGL1Q7L266 308 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SH2D6Q7Z4S9 175 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ADCK2Q7Z695 626 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 KIAA1328Q86T90 577 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 LRRC8AQ8IWT6 810 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 Q8IYB0 196 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 C5orf56Q8N8D9 126 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ACOT4Q8N9L9 421 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF439Q8NDP4 499 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SETD9Q8NE22 299 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 OR14L1PQ8NHC6 308 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MOSPD2Q8NHP6 518 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TMBIM1Q969X1 311 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 NABP1Q96AH0 204 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 HRASLS5Q96KN8 279 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CEP19Q96LK0 163 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RNF145Q96MT1 663 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MOGAT1Q96PD6 335 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 DDOQ99489 341 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 NABP2Q9BQ15 211 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 YIPF3Q9GZM5 350 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CHST5Q9GZS9 411 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RAD21L1Q9H4I0 556 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RPF2Q9H7B2 306 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 NMRAL1Q9HBL8 299 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SPAG4Q9NPE6 437 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MED9Q9NWA0 146 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ADPRHL2Q9NX46 363 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ING3Q9NXR8 418 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TAB2Q9NYJ8 693 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 DKK2Q9UBU2 259 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 GHRLQ9UBU3 117 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 VSIG4Q9Y279 399 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF337Q9Y3M9 751 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RPL36Q9Y3U8 105 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MPC1Q9Y5U8 109 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MAD1L1Q9Y6D9 718 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RELNP78509 3460 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CSMD3Q7Z407 3707 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 C5orf42Q9H799 3197 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TRAV5A0A0B4J249 113 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 C4orf51C9J302 202 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 RTCAO00442 366 aaKnown RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 GMFGO60234 142 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 CDC14BO60729 498 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM127O75204 238 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF324O75467 553 aaPredicted RBP1.14□□□□□ -2.23
LINC00643-201ENST00000334389 RGS11O94810 467 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MT-ND2P03891 347 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 RBP1P09455 135 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TRAPPC2P0DI81 140 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 TRAPPC2BP0DI82 140 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 RBL1P28749 1068 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 PRDX6P30041 224 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 MAS1LP35410 378 aa1.14□□□□□ -2.23
LINC00643-201ENST00000334389 ATP5OP48047 213 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms