RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CHODLQ9H9P2 273 aa14.28□□□□□ -0.12
UBE3D-208ENST00000626828 PNRC2Q9NPJ4 139 aaKnown RBP14.28□□□□□ -0.12
UBE3D-208ENST00000626828 KRT84Q9NSB2 600 aa14.28□□□□□ -0.12
UBE3D-208ENST00000626828 PURGQ9UJV8 347 aaKnown RBP14.28□□□□□ -0.12
UBE3D-208ENST00000626828 NSD1Q96L73 2696 aaPredicted RBP14.27□□□□□ -0.12
UBE3D-208ENST00000626828 TPD52L2O43399 206 aaKnown RBP14.27□□□□□ -0.13
UBE3D-208ENST00000626828 ADH4P08319 380 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 SPARCP09486 303 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 ACSM4P0C7M7 580 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 ACHEP22303 614 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 RPS27P42677 84 aaKnown RBP14.27□□□□□ -0.13
UBE3D-208ENST00000626828 CRYBB2P43320 205 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 RIN1Q13671 783 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 GGTLC2Q14390 218 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 PTGES3Q15185 160 aaKnown RBP14.27□□□□□ -0.13
UBE3D-208ENST00000626828 TAF13Q15543 124 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 TMEM249Q2WGJ8 235 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 KDM4DQ6B0I6 523 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 ZFP1Q6P2D0 407 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 PLBD1Q6P4A8 553 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 LYPD4Q6UWN0 246 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 FBXW12Q6X9E4 464 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 SHFQ7M4L6 423 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 INTS14Q96SY0 518 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 OSBPL10Q9BXB5 764 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 BPESC1Q9GZL8 116 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 EGLN1Q9GZT9 426 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 SEMA6AQ9H2E6 1030 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 POFUT1Q9H488 388 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 MARCH7Q9H992 704 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 TVP23BQ9NYZ1 205 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 ENOPH1Q9UHY7 261 aa14.27□□□□□ -0.13
UBE3D-208ENST00000626828 ZFHX3Q15911 3703 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 PRODHO43272 600 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 SPRY3O43610 288 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 TLX2O43763 284 aaPredicted RBP14.26□□□□□ -0.13
UBE3D-208ENST00000626828 CD5LO43866 347 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 IGHV1-46P01743 117 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 LCATP04180 440 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 SLC15A1P46059 708 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 CDK5R2Q13319 367 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 KPNB1Q14974 876 aaKnown RBP14.26□□□□□ -0.13
UBE3D-208ENST00000626828 TSTQ16762 297 aaKnown RBP14.26□□□□□ -0.13
UBE3D-208ENST00000626828 TMEM255AQ5JRV8 349 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 SLC35D3Q5M8T2 416 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 NAA40Q86UY6 237 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 OR10S1Q8NGN2 331 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 PYDC1Q8WXC3 89 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 SLAMF6Q96DU3 332 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 PRRG3Q9BZD7 231 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 GABARAPL1Q9H0R8 117 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 CENPMQ9NSP4 180 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 DDX28Q9NUL7 540 aaKnown RBP14.26□□□□□ -0.13
UBE3D-208ENST00000626828 PTTG3PQ9NZH4 202 aa14.26□□□□□ -0.13
UBE3D-208ENST00000626828 FN1P02751 2386 aaKnown RBP14.25□□□□□ -0.13
UBE3D-208ENST00000626828 M0R135 149 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 MITFO75030 526 aaPredicted RBP14.25□□□□□ -0.13
UBE3D-208ENST00000626828 NCR1O76036 304 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 TACSTD2P09758 323 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 KRTAP1-1Q07627 177 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 MALLQ13021 153 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 KLHL12Q53G59 568 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 CYB5R2Q6BCY4 276 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 DRAM2Q6UX65 266 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 RHOUQ7L0Q8 258 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 CXXC5Q7LFL8 322 aaKnown RBP14.25□□□□□ -0.13
UBE3D-208ENST00000626828 DPY19L4Q7Z388 723 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 ERI1Q8IV48 349 aaKnown RBP14.25□□□□□ -0.13
UBE3D-208ENST00000626828 OR6N2Q8NGY6 317 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 GTF3AQ92664 365 aaKnown RBP14.25□□□□□ -0.13
UBE3D-208ENST00000626828 ZNF799Q96GE5 643 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 RAB3IPQ96QF0 476 aaPredicted RBP14.25□□□□□ -0.13
UBE3D-208ENST00000626828 KCNJ15Q99712 375 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 MSL2Q9HCI7 577 aa14.25□□□□□ -0.13
UBE3D-208ENST00000626828 MALRD1Q5VYJ5 2156 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE3D-208ENST00000626828 IGHV4-61A0A0C4DH41 118 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 IGHV1-69-2A0A0G2JMI3 117 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 ZSCAN5BA6NJL1 495 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 LILRA1O75019 489 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 APOC1P02654 83 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 CD55P08174 381 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 SELEP16581 610 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 TNFSF4P23510 183 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 OTX1P32242 354 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-208ENST00000626828 GPR6P46095 362 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-208ENST00000626828 GZMKP49863 264 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 CHN2P52757 468 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 PPP2R2BQ00005 443 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 EIF2B1Q14232 305 aaKnown RBP14.24□□□□□ -0.13
UBE3D-208ENST00000626828 HLXQ14774 488 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-208ENST00000626828 TIGD4Q8IY51 512 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 ZNF454Q8N9F8 522 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 ST7LQ8TDW4 575 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 YIPF5Q969M3 257 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 ZMYND19Q96E35 227 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-208ENST00000626828 ELMOD3Q96FG2 381 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 ZNF582Q96NG8 517 aaPredicted RBP14.24□□□□□ -0.13
UBE3D-208ENST00000626828 COPS4Q9BT78 406 aa14.24□□□□□ -0.13
UBE3D-208ENST00000626828 ABHD6Q9BV23 337 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms