RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 KRT84Q9NSB2 600 aa13.8□□□□□ -0.2
LSM4-206ENST00000600289 GRIP1Q9Y3R0 1128 aa13.8□□□□□ -0.2
LSM4-206ENST00000600289 FAM183AA6NL82 134 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 PRR23D1E9PI22 279 aaPredicted RBP13.79□□□□□ -0.2
LSM4-206ENST00000600289 NCR1O76036 304 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 ACSM4P0C7M7 580 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 PRR23D2P0DMB1 279 aaPredicted RBP13.79□□□□□ -0.2
LSM4-206ENST00000600289 PSKH1P11801 424 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 ZNF23P17027 643 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 PSG7Q13046 419 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 RIN1Q13671 783 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 ZMAT1Q5H9K5 638 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 SLC35D3Q5M8T2 416 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 TMEM154Q6P9G4 183 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 LYPD4Q6UWN0 246 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 FBXW12Q6X9E4 464 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 ZNF511Q8NB15 262 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 OR10S1Q8NGN2 331 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 OR6K6Q8NGW6 343 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 ST7LQ8TDW4 575 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 DIRC2Q96SL1 478 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 POFUT1Q9H488 388 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.79□□□□□ -0.2
LSM4-206ENST00000600289 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
LSM4-206ENST00000600289 PLSCR5A0PG75 271 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 H3BNX3 289 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 HPXP02790 462 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 CD55P08174 381 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 RAC2P15153 192 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 ACHEP22303 614 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 USF1P22415 310 aaPredicted RBP13.78□□□□□ -0.2
LSM4-206ENST00000600289 SLC2A5P22732 501 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 ZNF81P51508 661 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 KPNB1Q14974 876 aaKnown RBP13.78□□□□□ -0.2
LSM4-206ENST00000600289 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
LSM4-206ENST00000600289 PLBD1Q6P4A8 553 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 RHOUQ7L0Q8 258 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 AMIGO2Q86SJ2 522 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 TIGD4Q8IY51 512 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 PYDC1Q8WXC3 89 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 RDH5Q92781 318 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 HAVCR1Q96D42 359 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 INTS14Q96SY0 518 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 PRRG3Q9BZD7 231 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 MED20Q9H944 212 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 CHODLQ9H9P2 273 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 TMEFF2Q9UIK5 374 aaPredicted RBP13.78□□□□□ -0.2
LSM4-206ENST00000600289 PURGQ9UJV8 347 aaKnown RBP13.78□□□□□ -0.2
LSM4-206ENST00000600289 ZDHHC8Q9ULC8 765 aa13.78□□□□□ -0.2
LSM4-206ENST00000600289 ZSCAN5BA6NJL1 495 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 ZAR1LA6NP61 321 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 ZNF878C9JN71 531 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 ZNF593O00488 134 aaPredicted RBP13.77□□□□□ -0.21
LSM4-206ENST00000600289 RP2O75695 350 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 IGHV1-46P01743 117 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 SPARCP09486 303 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 TACSTD2P09758 323 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 GSTT1P30711 240 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 RPS27P42677 84 aaKnown RBP13.77□□□□□ -0.21
LSM4-206ENST00000600289 MAGEB1P43366 347 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 TPTEP56180 551 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 ALKBH6Q3KRA9 238 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 SLX4IPQ5VYV7 408 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 TMEM236Q5W0B7 351 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 DCXRQ7Z4W1 244 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 MAPK1IP1LQ8NDC0 245 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 SPTSSAQ969W0 71 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 SLAMF6Q96DU3 332 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 PLEKHA8Q96JA3 519 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 RAB3IPQ96QF0 476 aaPredicted RBP13.77□□□□□ -0.21
LSM4-206ENST00000600289 BPESC1Q9GZL8 116 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 OAZ3Q9UMX2 235 aa13.77□□□□□ -0.21
LSM4-206ENST00000600289 M0R135 149 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 CD5LO43866 347 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 TIMM8AO60220 97 aaPredicted RBP13.76□□□□□ -0.21
LSM4-206ENST00000600289 IGFBP5P24593 272 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 CRYBB2P43320 205 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 EFNB1P98172 346 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 CDK5R2Q13319 367 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 TMEM249Q2WGJ8 235 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 C12orf73Q69YU5 71 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 DRAM2Q6UX65 266 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 SHFQ7M4L6 423 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 CPOQ8IVL8 374 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 TMEM158Q8WZ71 300 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 GTF3AQ92664 365 aaKnown RBP13.76□□□□□ -0.21
LSM4-206ENST00000600289 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 ZNF799Q96GE5 643 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 KCNJ15Q99712 375 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 GABARAPL3Q9BY60 117 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 TOR3AQ9H497 397 aa13.76□□□□□ -0.21
LSM4-206ENST00000600289 A0A1B0GWJ7 208 aa13.75□□□□□ -0.21
LSM4-206ENST00000600289 F5H5K5 113 aa13.75□□□□□ -0.21
LSM4-206ENST00000600289 TLX2O43763 284 aaPredicted RBP13.75□□□□□ -0.21
LSM4-206ENST00000600289 MITFO75030 526 aaPredicted RBP13.75□□□□□ -0.21
LSM4-206ENST00000600289 TMEM33P57088 247 aa13.75□□□□□ -0.21
LSM4-206ENST00000600289 GRB2P62993 217 aaKnown RBP13.75□□□□□ -0.21
LSM4-206ENST00000600289 CCL8P80075 99 aa13.75□□□□□ -0.21
LSM4-206ENST00000600289 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
LSM4-206ENST00000600289 CARTPTQ16568 116 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms