RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 SMARCD3Q6STE5 483 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 DPY19L2P2Q6ZN68 376 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 COLCA1Q6ZS62 124 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 KLHL36Q8N4N3 616 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 SIGLECL1Q8N7X8 197 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 SLC26A10Q8NG04 563 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 GCDHQ92947 438 aaPredicted RBP8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 SLC30A2Q9BRI3 323 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 OR52D1Q9H346 318 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 RERGLQ9H628 205 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 EFCAB1Q9HAE3 211 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 SPAG4Q9NPE6 437 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 PNRC2Q9NPJ4 139 aaKnown RBP8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 DCAF13Q9NV06 445 aaKnown RBP8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 ZNF69Q9UC07 566 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 RPS6KA6Q9UK32 745 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 SAMD4AQ9UPU9 718 aaKnown RBP8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 POLR1DQ9Y2S0 133 aa8.51□□□□□ -1.05
SNRPA1-212ENST00000560496 UNC119BA6NIH7 251 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 SURF4O15260 269 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 SPRY1O43609 319 aaPredicted RBP8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 FAM107AO95990 144 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 CYB5R3P00387 301 aaPredicted RBP8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 HKR1P10072 659 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 PSKH1P11801 424 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 HIST1H1CP16403 213 aaKnown RBP8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 SELEP16581 610 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 MDH1P40925 334 aaKnown RBP8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 RPS6KA3P51812 740 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 PSME3P61289 254 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 ZNF181Q2M3W8 571 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 ESCO2Q56NI9 601 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 GLYATQ6IB77 296 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 SLC18B1Q6NT16 456 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 LEG1Q6P5S2 330 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 PGM2L1Q6PCE3 622 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 RRM2BQ7LG56 351 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 LINC00346Q8IVM7 164 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 BCL6BQ8N143 479 aaPredicted RBP8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 OR6V1Q8N148 313 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 MUC20Q8N307 709 aaPredicted RBP8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 RNF148Q8N7C7 305 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 BHLHE23Q8NDY6 225 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 OR8G5Q8NG78 346 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 OR52J3Q8NH60 311 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 PTP4A1Q93096 173 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 APOBEC3DQ96AK3 386 aaPredicted RBP8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 DUX5Q96PT3 197 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 C1QTNF5Q9BXJ0 243 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 FN3KQ9H479 309 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 WDR76Q9H967 626 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 NTN4Q9HB63 628 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 NUP50Q9UKX7 468 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 AUP1Q9Y679 476 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 V9GYQ6 96 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 MGAM2Q2M2H8 2515 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 DOCK11Q5JSL3 2073 aa8.5□□□□□ -1.05
SNRPA1-212ENST00000560496 IGHV2-70DA0A0C4DH43 119 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 IGHV3-64DA0A0J9YX35 117 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 F5H5P2 479 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ARPC3O15145 178 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 WIPF1O43516 503 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ZNF205O95201 554 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 PLATP00750 562 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 WNT2P09544 360 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ACSM4P0C7M7 580 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 IGHV4-38-2P0DP08 117 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 RPS2P15880 293 aaKnown RBP8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 PRTN3P24158 256 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 FPR3P25089 353 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 CRABP1P29762 137 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 PMELP40967 661 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 RAD23AP54725 363 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 HOXA4Q00056 320 aaPredicted RBP8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 SPIBQ01892 262 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ZNF404Q494X3 552 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 FAM201AQ5SY85 155 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 DNM1P34Q6PK57 102 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ZNF620Q6ZNG0 422 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 C9orf139Q6ZV77 190 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ZBTB46Q86UZ6 589 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 KLBQ86Z14 1044 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 PARP8Q8N3A8 854 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 C3orf56Q8N813 242 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 SDR9C7Q8NEX9 313 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 GJC3Q8NFK1 279 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 OR10S1Q8NGN2 331 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ERMAPQ96PL5 475 aaPredicted RBP8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 NMNAT3Q96T66 252 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 TMEM246Q9BRR3 403 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 MRI1Q9BV20 369 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 SSBP3Q9BWW4 388 aaPredicted RBP8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 KRCC1Q9NPI7 259 aaPredicted RBP8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 RPRD1BQ9NQG5 326 aaKnown RBP8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 ETAA1Q9NY74 926 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 OR5V1Q9UGF6 321 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 B9D1Q9UPM9 204 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 AURKCQ9UQB9 309 aa8.49□□□□□ -1.05
SNRPA1-212ENST00000560496 TRAV40A0A0B4J280 105 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms