RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MSRB3Q8IXL7 192 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 OR2Z1Q8NG97 314 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 OR14K1Q8NGZ2 314 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 VANGL1Q8TAA9 524 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 STON2Q8WXE9 905 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 LHX4Q969G2 390 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 SLC35B4Q969S0 331 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 CLPTM1LQ96KA5 538 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 SLC35A5Q9BS91 424 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 CADM1Q9BY67 442 aaKnown RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 MMP28Q9H239 520 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 MAN2C1Q9NTJ4 1040 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 MRPL39Q9NYK5 338 aaKnown RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 TAS2R1Q9NYW7 299 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 VPREB3Q9UKI3 123 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF443Q9Y2A4 671 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 SIGLEC9Q9Y336 463 aa5.63□□□□□ -1.51
ATXN3-236ENST00000556220 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
ATXN3-236ENST00000556220 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 BTBD17A6NE02 478 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ANKRD61A6NGH8 418 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 SERPINI2O75830 405 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 CYB5R3P00387 301 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-236ENST00000556220 BGLAPP02818 100 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 QDPRP09417 244 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 NHLRC4P0CG21 123 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-236ENST00000556220 IGLL1P15814 213 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 KIR2DS4P43632 304 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 GDI2P50395 445 aaKnown RBP5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ANXA11P50995 505 aaKnown RBP5.62□□□□□ -1.51
ATXN3-236ENST00000556220 KRTAP10-11P60412 298 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 EMX2Q04743 252 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 COX10Q12887 443 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF404Q494X3 552 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 PDCD4Q53EL6 469 aaKnown RBP5.62□□□□□ -1.51
ATXN3-236ENST00000556220 METTL11BQ5VVY1 283 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 PGBD2Q6P3X8 592 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 C1orf122Q6ZSJ8 110 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 RFPL4BQ6ZWI9 263 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 CNPY4Q8N129 248 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 LYG1Q8N1E2 194 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 LRRC18Q8N456 261 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 KLHDC1Q8N7A1 406 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 SPERTQ8NA61 448 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 SCCPDHQ8NBX0 429 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 OR4F17Q8NGA8 305 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF420Q8TAQ5 688 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF566Q969W8 418 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 R3HDM4Q96D70 268 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 SLC25A44Q96H78 314 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-236ENST00000556220 WDFY2Q96P53 400 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 OR2V2Q96R30 315 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 OR4F4Q96R69 305 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ZNF607Q96SK3 696 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 KCNN2Q9H2S1 579 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ARMC7Q9H6L4 198 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 SIAEQ9HAT2 523 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 ELOVL3Q9HB03 270 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 RPS6KB2Q9UBS0 482 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 IFT52Q9Y366 437 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 FAM96BQ9Y3D0 163 aa5.62□□□□□ -1.51
ATXN3-236ENST00000556220 A0A1B0GWA3 101 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 CCDC154A6NI56 674 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 FBP1P09467 338 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 KITLGP21583 273 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 PSMB10P40306 273 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 CRATP43155 626 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 MRPL19P49406 292 aaKnown RBP5.61□□□□□ -1.51
ATXN3-236ENST00000556220 NPY4RP50391 375 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 ARHGDIAP52565 204 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 CRISP3P54108 245 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 UFM1P61960 85 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 PSG4Q00888 419 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 MAD2L1Q13257 205 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-236ENST00000556220 SELPLGQ14242 412 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 KRT72Q14CN4 511 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 HIST3H3Q16695 136 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 GTDC1Q4AE62 458 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 KLHL22Q53GT1 634 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 TM4SF20Q53R12 229 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 RUNDC3AQ59EK9 446 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 PAGE3Q5JUK9 113 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 FAM201AQ5SY85 155 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 CASC10Q5T4H9 136 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 PGM2L1Q6PCE3 622 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 LYPD2Q6UXB3 125 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 SLC35D2Q76EJ3 337 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 TRIML2Q8N7C3 387 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 LSMEM1Q8N8F7 131 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 OR5R1Q8NH85 324 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 PPP1R35Q8TAP8 253 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 NPRL2Q8WTW4 380 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 DNAJA4Q8WW22 397 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-236ENST00000556220 MCHR2Q969V1 340 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 TUBGCP3Q96CW5 907 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 C4orf45Q96LM5 186 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 MOGAT1Q96PD6 335 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 EPYCQ99645 322 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 CCDC28BQ9BUN5 200 aa5.61□□□□□ -1.51
ATXN3-236ENST00000556220 PPA2Q9H2U2 334 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms