RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PIAS1O75925 651 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SUPT7LO94864 414 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 AHSA1O95433 338 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 PLA2G1BP04054 148 aaKnown RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 THRBP10828 461 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 CCL2P13500 99 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 IRF2P14316 349 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 B4GALT1P15291 398 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 GCAP28676 217 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 RPL3P39023 403 aaKnown RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 MDH1P40925 334 aaKnown RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SERPINB9P50453 376 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 MVDP53602 400 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SLC18A1P54219 525 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 GNGT1P63211 74 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 HSF2Q03933 536 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 MED22Q15528 200 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 AANATQ16613 207 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 RNF151Q2KHN1 245 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 CARD17Q5XLA6 110 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 DCDC5Q6ZRR9 648 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 GPRIN3Q6ZVF9 776 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 CENPVQ7Z7K6 275 aaPredicted RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF584Q8IVC4 421 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 UEVLDQ8IX04 471 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 CENPLQ8N0S6 344 aaPredicted RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SLC22A24Q8N4F4 322 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SCAIQ8N9R8 606 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 FAM71CQ8NEG0 241 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 OR5AU1Q8NGC0 362 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 PNPT1Q8TCS8 783 aaKnown RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SLC7A13Q8TCU3 470 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 DYDC1Q8WWB3 177 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 OR5P2Q8WZ92 322 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 ISOC1Q96CN7 298 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 TUBGCP3Q96CW5 907 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 PGAM5Q96HS1 289 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF583Q96ND8 569 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 OR7D2Q96RA2 312 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SIGLEC11Q96RL6 698 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SSX3Q99909 188 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 MRPL57Q9BQC6 102 aaKnown RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SPATA25Q9BR10 227 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 C1QTNF3Q9BXJ4 246 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 ULBP2Q9BZM5 246 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 PRSS22Q9GZN4 317 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 GCM1Q9NP62 436 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 PCDHB16Q9NRJ7 776 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 INPP5EQ9NRR6 644 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 INTS9Q9NV88 658 aaKnown RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 DCAF16Q9NXF7 216 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 NKIRAS1Q9NYS0 192 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 MRPL15Q9P015 296 aaKnown RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 ATP6V1HQ9UI12 483 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 KCNE5Q9UJ90 142 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF225Q9UK10 706 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 WDR45Q9Y484 360 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 POLR3HQ9Y535 204 aaPredicted RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 TSSC4Q9Y5U2 329 aaPredicted RBP4.21□□□□□ -1.74
CKAP4-203ENST00000553039 KPTNQ9Y664 436 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 A0A1W2PRX2 142 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 MEIOCA2RUB1 952 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 LSM1O15116 133 aaKnown RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 NPFFO15130 113 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 CFLARO15519 480 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 FZD7O75084 574 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 RPS17P08708 135 aaKnown RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 SNRPAP09012 282 aaKnown RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 PATE4P0C8F1 98 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM225BP0DP42 221 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 PNMTP11086 282 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 KRT4P19013 534 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 TAC1P20366 129 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 GSTM3P21266 225 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 STOMP27105 288 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ARRB2P32121 409 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 SRP9P49458 86 aaKnown RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 GDI2P50395 445 aaKnown RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 PKNOX1P55347 436 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 PCLAFQ15004 111 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF181Q2M3W8 571 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF404Q494X3 552 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 CDONQ4KMG0 1287 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 RUNDC3AQ59EK9 446 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 WBP2NLQ6ICG8 309 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 METAP1DQ6UB28 335 aaPredicted RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF841Q6ZN19 808 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 SLC16A14Q7RTX9 510 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 C6orf120Q7Z4R8 191 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 IGFN1Q86VF2 1251 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 PDZD9Q8IXQ8 264 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 IZUMO1Q8IYV9 350 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF101Q8IZC7 436 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM123Q8N131 208 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 C4orf33Q8N1A6 199 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 PAQR4Q8N4S7 273 aaPredicted RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM116Q8NCL8 245 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 RBM15BQ8NDT2 890 aaKnown RBP4.2□□□□□ -1.74
CKAP4-203ENST00000553039 BEND2Q8NDZ0 799 aa4.2□□□□□ -1.74
CKAP4-203ENST00000553039 OR51D1Q8NGF3 324 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms