RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 VHLLQ6RSH7 139 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 LRP11Q86VZ4 500 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF679Q8IYX0 411 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 BPIFB6Q8NFQ5 453 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 IGFBPL1Q8WX77 278 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ASB17Q8WXJ9 295 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 SGCDQ92629 289 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 CNBD2Q96M20 576 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 COPS4Q9BT78 406 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 C1QTNF5Q9BXJ0 243 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 UBTD1Q9HAC8 227 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ELOVL3Q9HB03 270 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 CA10Q9NS85 328 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 TBCCD1Q9NVR7 557 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 FKBP14Q9NWM8 211 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF319Q9P2F9 582 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 PSORS1C1Q9UIG5 152 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 POU2F3Q9UKI9 436 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 TMEM14AQ9Y6G1 99 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 LRBAP50851 2863 aa11.22□□□□□ -0.61
RAB5C-206ENST00000550406 SLC1A7O00341 560 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 PHYHO14832 338 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 SRSF10O75494 262 aaKnown RBP11.21□□□□□ -0.61
RAB5C-206ENST00000550406 SOD3P08294 240 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 LIMS3P0CW19 117 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 LIMS4P0CW20 117 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 SLC2A1P11166 492 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 RAD52P43351 418 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 TPTEP56180 551 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 EGR3Q06889 387 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 TAF13Q15543 124 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 KLHL22Q53GT1 634 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 KCTD18Q6PI47 426 aaPredicted RBP11.21□□□□□ -0.61
RAB5C-206ENST00000550406 DEGS2Q6QHC5 323 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 DRAM2Q6UX65 266 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 PLEKHG7Q6ZR37 379 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 LHFPL3Q86UP9 236 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 ACBD7Q8N6N7 88 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF611Q8N823 705 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 OR1J1Q8NGS3 322 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 ABHD4Q8TB40 342 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 SLC25A40Q8TBP6 338 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 FBXW5Q969U6 566 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 SPTSSAQ969W0 71 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 MARS2Q96GW9 593 aaKnown RBP11.21□□□□□ -0.61
RAB5C-206ENST00000550406 BCL2L14Q9BZR8 327 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 PAK1IP1Q9NWT1 392 aaPredicted RBP11.21□□□□□ -0.61
RAB5C-206ENST00000550406 FZR1Q9UM11 496 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 SPEF1Q9Y4P9 236 aa11.21□□□□□ -0.61
RAB5C-206ENST00000550406 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 CYSRT1A8MQ03 144 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 FAM20BO75063 409 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 FADS2O95864 444 aaKnown RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 CLPTM1O96005 669 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 PNPP00491 289 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 LCKP06239 509 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 OR4A8P0C604 315 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 ZNF250P15622 560 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 APOBEC3AP31941 199 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 TTKP33981 857 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 MPV17P39210 176 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 CX3CR1P49238 355 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 ETV1P50549 477 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 FABP6P51161 128 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 OR12D2P58182 307 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 ZNF121P58317 390 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 PPP1CBP62140 327 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 CDONQ4KMG0 1287 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 SPATA46Q5T0L3 261 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 KRT77Q7Z794 578 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 ZNF283Q8N7M2 679 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 PPP1R14AQ96A00 147 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 APOBEC3DQ96AK3 386 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 DOK1Q99704 481 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 JAM3Q9BX67 310 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 MRPL37Q9BZE1 423 aaKnown RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 OR2J1Q9GZK6 312 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 FAM206AQ9NX38 181 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 ERVK13-1Q9NX77 482 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 CNOT2Q9NZN8 540 aaKnown RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 MYEF2Q9P2K5 600 aaKnown RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 EIF3KQ9UBQ5 218 aaKnown RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 DIMT1Q9UNQ2 313 aaKnown RBP11.2□□□□□ -0.62
RAB5C-206ENST00000550406 PCDHGB1Q9Y5G3 927 aa11.2□□□□□ -0.62
RAB5C-206ENST00000550406 AKAP6Q13023 2319 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 METTL15A6NJ78 407 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 ZNF254O75437 659 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 LCATP04180 440 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 PIPP12273 146 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-206ENST00000550406 DCKP27707 260 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 HSD11B1P28845 292 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 DCTDP32321 178 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 RGS6P49758 472 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 ACTC1P68032 377 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 ACTA1P68133 377 aa11.19□□□□□ -0.62
RAB5C-206ENST00000550406 MFGE8Q08431 387 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms