RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 LOC100653049A0A140TA62 436 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 KIR2DS1A0A191URI9 304 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 A0A1B0GUS0 222 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 IQCF6A8MYZ5 107 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 B2RBV5 119 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 SLC16A7O60669 478 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 PTP4A3O75365 173 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 DNAJC8O75937 253 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-218ENST00000548945 KRT34O76011 436 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 NDUFB2O95178 105 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 RBMXP38159 391 aaKnown RBP10.75□□□□□ -0.69
PTCH1-218ENST00000548945 GATA4P43694 442 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 MXRA7P84157 204 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 KRR1Q13601 381 aaKnown RBP10.75□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF404Q494X3 552 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 PDLIM3Q53GG5 364 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-218ENST00000548945 HIST2H3PS2Q5TEC6 136 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 OR2T2Q6IF00 324 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 C1orf94Q6P1W5 598 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 CBLL1Q75N03 491 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 CYP4Z1Q86W10 505 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 OR5AS1Q8N127 324 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 CELF2-AS1Q8N7Q2 184 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 GJC3Q8NFK1 279 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 OR10AD1Q8NGE0 317 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 OR8B3Q8NGG8 313 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 SLC7A6OSQ96CW6 309 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-218ENST00000548945 OR8B2Q96RD0 313 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 COQ7Q99807 217 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 TMEM246Q9BRR3 403 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 HDHD2Q9H0R4 259 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 C1orf21Q9H246 121 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 NDE1Q9NXR1 346 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 SIGLEC7Q9Y286 467 aa10.75□□□□□ -0.69
PTCH1-218ENST00000548945 COA3Q9Y2R0 106 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-218ENST00000548945 TRAV40A0A0B4J280 105 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 A0A1W2PRQ8 180 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 CXCR6O00574 342 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 PHYHO14832 338 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 RER1O15258 196 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 GYG2O15488 501 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 MLNRO43193 412 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF682O95780 498 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 TXNDC12O95881 172 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 CYB5R3P00387 301 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-218ENST00000548945 DBHP09172 617 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 SELEP16581 610 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 PITPNBP48739 271 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 DGCR6Q14129 220 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 HLXQ14774 488 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-218ENST00000548945 DNAL1Q4LDG9 190 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF362Q5T0B9 420 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-218ENST00000548945 TBPL2Q6SJ96 375 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 COLCA1Q6ZS62 124 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 FKBP9P1Q75LS8 142 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 ASRGL1Q7L266 308 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF420Q8TAQ5 688 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-218ENST00000548945 SLC7A13Q8TCU3 470 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 ERGIC1Q969X5 290 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 TMIGD2Q96BF3 282 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 BTBD10Q9BSF8 475 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 EFCAB1Q9HAE3 211 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 CMTM6Q9NX76 183 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 PTTG3PQ9NZH4 202 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 ENPP4Q9Y6X5 453 aa10.74□□□□□ -0.69
PTCH1-218ENST00000548945 CRABP1P29762 137 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 NUDT2P50583 147 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 LIPEQ05469 1076 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 DNM1P34Q6PK57 102 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 DPY19L2P2Q6ZN68 376 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 DCDC5Q6ZRR9 648 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 MOGAT3Q86VF5 341 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 SLC15A3Q8IY34 581 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 Q8TCH9 128 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 RCN3Q96D15 328 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 HSH2DQ96JZ2 352 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 RAB3IPQ96QF0 476 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-218ENST00000548945 NUDT16L1Q9BRJ7 211 aaKnown RBP10.73□□□□□ -0.69
PTCH1-218ENST00000548945 HCAR1Q9BXC0 346 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 NUAK2Q9H093 628 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 RERGLQ9H628 205 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 NOX4Q9NPH5 578 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 TMEM100Q9NV29 134 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 TAS2R1Q9NYW7 299 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 CLN8Q9UBY8 286 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 POLR1DQ9Y2S0 133 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 LHFPL6Q9Y693 200 aa10.73□□□□□ -0.69
PTCH1-218ENST00000548945 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 F5H5P2 479 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 H0YL77 283 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 GSTA4O15217 222 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF205O95201 554 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 GPANK1O95872 356 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 H1F0P07305 194 aaKnown RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 IRF2P14316 349 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 MDKP21741 143 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 FPR3P25089 353 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 NPY4RP50391 375 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms