RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 BRICD5Q6PL45 260 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM99Q8N816 258 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 OR4M2Q8NGB6 313 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 TXNIPQ9H3M7 391 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 MOB1AQ9H8S9 216 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 HEYLQ9NQ87 328 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 PRDM6Q9NQX0 595 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF230Q9UIE0 474 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 OSGIN1Q9UJX0 560 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 MAB21L2Q9Y586 359 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 XIRP1Q702N8 1843 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 DOCK3Q8IZD9 2030 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 EPOPA6NHQ4 379 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 DEGS1O15121 323 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC16A6O15403 523 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 OIP5O43482 229 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 CLDN12P56749 244 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 TAS2R20P59543 309 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 IL13RA1P78552 427 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 CEACAM16Q2WEN9 425 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ACTBL2Q562R1 376 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF620Q6ZNG0 422 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 GCNT2Q8N0V5 402 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 OR52H1Q8NGJ2 320 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 SECTM1Q8WVN6 248 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 FGF11Q92914 225 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 ATF6BQ99941 703 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 TCEAL7Q9BRU2 100 aa6.25□□□□□ -1.41
SRGAP1-206ENST00000543397 KCNE1BA0A087WTH5 132 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 A6NIN4 97 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 XRCC2O43543 280 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 GPR137BO60478 399 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 PRPH2P23942 346 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 GALEQ14376 348 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 RNPS1Q15287 305 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SPRED3Q2MJR0 410 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 AKR1C8PQ5T2L2 129 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 RGS7BPQ6MZT1 257 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TGIF2LXQ8IUE1 241 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SPNS2Q8IVW8 549 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 FBXL14Q8N1E6 418 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 BPIFB2Q8N4F0 458 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR6M1Q8NGM8 313 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 KTI12Q96EK9 354 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR14A2Q96R54 314 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TEAD3Q99594 435 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TIMP4Q99727 224 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 THAP7Q9BT49 309 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF768Q9H5H4 540 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM60AQ9NP50 221 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ACKR4Q9NPB9 350 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CYB5R1Q9UHQ9 305 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM96BQ9Y3D0 163 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 IGHV3-64DA0A0J9YX35 117 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 DNPH1O43598 174 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CNIH1O95406 144 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CD160O95971 181 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 EIF4EP06730 217 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TFPTP0C1Z6 253 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 HIST1H1CP16403 213 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ACHEP22303 614 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ARRB2P32121 409 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 EMDP50402 254 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SNRPD2P62316 118 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 YBX1P67809 324 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SHBQ15464 509 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 LIPNQ5VXI9 398 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ANKRD34AQ69YU3 496 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 KIRREL2Q6UWL6 708 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 PRSS41Q7RTY9 318 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 BTLAQ7Z6A9 289 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SYT9Q86SS6 491 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF546Q86UE3 836 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR4M1Q8NGD0 313 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 PHYHIPQ92561 330 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TAAR8Q969N4 342 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 KCTD12Q96CX2 325 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CXorf58Q96LI9 332 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 UNKLQ9H9P5 680 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CMC2Q9NRP2 79 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 PRSS37A4D1T9 235 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR5H15A6NDH6 313 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 HPP00738 406 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 IFNA4P05014 189 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SUCLG1P53597 346 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 STARD6P59095 220 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 INSM1Q01101 510 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ADPRMQ3LIE5 342 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM81Q6P7N7 255 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 EID2BQ96D98 161 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SNX18Q96RF0 628 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM100Q9NV29 134 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CLEC5AQ9NY25 188 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC25A37Q9NYZ2 338 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 PCYT1BQ9Y5K3 369 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 KPTNQ9Y664 436 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CACNG2Q9Y698 323 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 XKRY2A2RUG3 117 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR6C6A6NF89 314 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms