RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TRAV18A0A075B6X5 111 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 PMS2P1A4D2B8 440 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 ZIC3O60481 467 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 TTRP02766 147 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 ACSM4P0C7M7 580 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 CD37P11049 281 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 LIFP15018 202 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 HTR2CP28335 458 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 MLF1P58340 268 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 GPR85P60893 370 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 RAP2BP61225 183 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 RIPPLY1Q0D2K3 151 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF239Q16600 458 aaKnown RBP11.87□□□□□ -0.51
VPS33B-202ENST00000535906 HIST3H3Q16695 136 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 TMEM244Q5VVB8 128 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 SLC25A47Q6Q0C1 308 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 RHBDD1Q8TEB9 315 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 NTNG2Q96CW9 530 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 UBQLN2Q9UHD9 624 aa11.87□□□□□ -0.51
VPS33B-202ENST00000535906 GDF2Q9UK05 429 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-202ENST00000535906 STK17BO94768 372 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 QDPRP09417 244 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 UBCP0CG48 685 aaKnown RBP11.86□□□□□ -0.51
VPS33B-202ENST00000535906 FKBP2P26885 142 aaKnown RBP11.86□□□□□ -0.51
VPS33B-202ENST00000535906 SLC35A1P78382 337 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 H3F3AP84243 136 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 SSBP1Q04837 148 aaKnown RBP11.86□□□□□ -0.51
VPS33B-202ENST00000535906 CSRP2Q16527 193 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 CLLU1Q5K131 121 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 SLC36A1Q7Z2H8 476 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 OR6N1Q8NGY5 312 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 MARVELD3Q96A59 401 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 GINS4Q9BRT9 223 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 HPF1Q9NWY4 346 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 FBXO4Q9UKT5 387 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 A0A087WZY1 265 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 LOC102725191A0A1B0GVB3 256 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 RPS10-NUDT3A0A1W2PQS6 291 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 PLSCR5A0PG75 271 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 OR2M5A3KFT3 312 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 B4E171 279 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 M0R233 179 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 SNAPC5O75971 98 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 AKAIN1P0CW23 69 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 PRSS3P35030 304 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 TSPAN7P41732 249 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 DSCR4P56555 118 aaPredicted RBP11.86□□□□□ -0.51
VPS33B-202ENST00000535906 GRK1Q15835 563 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 RAET1LQ5VY80 246 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 DBX2Q6ZNG2 339 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 CCDC28AQ8IWP9 274 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 DTWD2Q8NBA8 298 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 OR4D10Q8NGI6 311 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 FGGYQ96C11 551 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 TMPRSS13Q9BYE2 586 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 PBOV1Q9GZY1 135 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 ATG5Q9H1Y0 275 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 ARRDC1-AS1Q9H2J1 176 aa11.86□□□□□ -0.51
VPS33B-202ENST00000535906 GPR179Q6PRD1 2367 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 ZNF726A6NNF4 738 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 PMS2P2O95744 297 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 VSIG10L2P0DP72 767 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 GTF2F2P13984 249 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 C4BPBP20851 252 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 CLDN17P56750 224 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 CCDC157Q569K6 752 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 DCAF12Q5T6F0 453 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 KLHL24Q6TFL4 600 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 LYPD6Q86Y78 171 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 JAGN1Q8N5M9 183 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 OR52B4Q8NGK2 314 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 C17orf50Q8WW18 174 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 GAL3ST1Q99999 423 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
VPS33B-202ENST00000535906 ASH2LQ9UBL3 628 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 POLR1DQ9Y2S0 133 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 BDP1A6H8Y1 2624 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 IGHV3-15A0A0B4J1V0 119 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 UBE2QL1A1L167 161 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 MEGF11A6BM72 1044 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 MEIS3P1A6NDR6 274 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 RER1O15258 196 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 CFDP00746 253 aaPredicted RBP11.85□□□□□ -0.51
VPS33B-202ENST00000535906 MPLP40238 635 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 CLDN6P56747 220 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 Q0VFX4 171 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 POU4F3Q15319 338 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
VPS33B-202ENST00000535906 HDDC2Q7Z4H3 204 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 PPP1R32Q7Z5V6 425 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 OR6M1Q8NGM8 313 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 OR2AJ1Q8NGZ0 328 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 GPX8Q8TED1 209 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 TCFL5Q9UL49 500 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 PADI1Q9ULC6 663 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 LOXL2Q9Y4K0 774 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 MAB21L2Q9Y586 359 aa11.85□□□□□ -0.51
VPS33B-202ENST00000535906 FCER2P06734 321 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms