RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ELL3Q9HB65 397 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 CD300AQ9UGN4 299 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ZNF221Q9UK13 617 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 FBXL3Q9UKT7 428 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 COMMD3-BMI1R4GMX3 469 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 RNF103-CHMP3A0A140T963 221 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 NPFFO15130 113 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SKAP2O75563 359 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 IGLV2-14P01704 120 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 MT-ND1P03886 318 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 CST2P09228 141 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 QDPRP09417 244 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 KITP10721 976 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 AQP2P41181 271 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ZNF81P51508 661 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ARL4CP56559 192 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SLC35A1P78382 337 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 PIN1Q13526 163 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 ASCL4Q6XD76 172 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SLC16A14Q7RTX9 510 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 CENPVQ7Z7K6 275 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 FBXL14Q8N1E6 418 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 GLB1L3Q8NCI6 653 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 OR4Q3Q8NH05 313 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ZNF418Q8TF45 676 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 MYDGFQ969H8 173 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 PTGES2Q9H7Z7 377 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 MTHFD2LQ9H903 347 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 IL20Q9NYY1 176 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 MTCH1Q9NZJ7 389 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 CCDC154A6NI56 674 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 E9PBE3 544 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 J3KTA2 159 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 COQ9O75208 318 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SUPT7LO94864 414 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 TCP1P17987 556 aaKnown RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 CNTFRP26992 372 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 LSP1P33241 339 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 OPRL1P41146 370 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 TERF1P54274 439 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 PLTPP55058 493 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 LSM6P62312 80 aaKnown RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 FAM83EQ2M2I3 478 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SLC27A4Q6P1M0 643 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 NIPAL3Q6P499 406 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SPATC1Q76KD6 591 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 VMO1Q7Z5L0 202 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 NDUFA11Q86Y39 141 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 GPHB5Q86YW7 130 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 C11orf44Q8N8P7 122 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 CORO2AQ92828 525 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 APOPT1Q96IL0 206 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ECSITQ9BQ95 431 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 FAIM2Q9BWQ8 316 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 HOXD1Q9GZZ0 328 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 WDR76Q9H967 626 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 CMTM6Q9NX76 183 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SIGLEC8Q9NYZ4 499 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ATP23Q9Y6H3 246 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 IGHV3-64DA0A0J9YX35 117 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SYNGR1O43759 233 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 RBMY1A1P0DJD3 496 aaKnown RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 RBMY1CP0DJD4 496 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 CLUP10909 449 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 HNRNPA3P51991 378 aaKnown RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 VSNL1P62760 191 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 RPL38P63173 70 aaKnown RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 TNFRSF9Q07011 255 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ZNF146Q15072 292 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 RBMY1FQ15415 496 aaKnown RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 OR1Q1Q15612 314 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 MEP1BQ16820 701 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 PCGF3Q3KNV8 242 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SIGIRRQ6IA17 410 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 WBP2NLQ6ICG8 309 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 C1orf94Q6P1W5 598 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 ZNF613Q6PF04 617 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 EPGNQ6UW88 154 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 C16orf89Q6UX73 402 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SLC35D2Q76EJ3 337 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 BTN2A1Q7KYR7 527 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 OR2AE1Q8NHA4 323 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 CEP70Q8NHQ1 597 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 FAM110DQ8TAY7 271 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 C11orf40Q8WZ69 217 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 FAM71F1Q96KD3 344 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 ADAD1Q96M93 576 aaKnown RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 OVOL2Q9BRP0 275 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 SSBP4Q9BWG4 385 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 NUAK2Q9H093 628 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 TXNIPQ9H3M7 391 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 MID1IP1Q9NPA3 183 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 TMEM45AQ9NWC5 275 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 FAM206AQ9NX38 181 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 P2RX2Q9UBL9 471 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.26□□□□□ -2.21
KNL1-211ENST00000533001 ANGPT4Q9Y264 503 aa1.26□□□□□ -2.21
KNL1-211ENST00000533001 A0A088AWK7 358 aa1.25□□□□□ -2.21
KNL1-211ENST00000533001 CFAP73A6NFT4 308 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms