RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 LRRN1Q6UXK5 716 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 SSX6Q7RTT6 188 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 THAP5Q7Z6K1 395 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 OR10H4Q8NGA5 316 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 ABHD4Q8TB40 342 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 SPTSSAQ969W0 71 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 LGALS12Q96DT0 336 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 DCLRE1CQ96SD1 692 aaKnown RBP12.06□□□□□ -0.48
USF1-209ENST00000529476 MNTQ99583 582 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 KCNJ15Q99712 375 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 ZNF442Q9H7R0 627 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 SLCO1C1Q9NYB5 712 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 FZR1Q9UM11 496 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 RPL36Q9Y3U8 105 aaKnown RBP12.06□□□□□ -0.48
USF1-209ENST00000529476 TMEM14AQ9Y6G1 99 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 ABCA2Q9BZC7 2435 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 J3QRE1 110 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 M0R135 149 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 MAGEB4O15481 346 aaPredicted RBP12.05□□□□□ -0.48
USF1-209ENST00000529476 SOD3P08294 240 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 OR4A8P0C604 315 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 OR2T7P0C7T2 308 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ANOS1P23352 680 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 APOBEC3AP31941 199 aaPredicted RBP12.05□□□□□ -0.48
USF1-209ENST00000529476 OTX1P32242 354 aaPredicted RBP12.05□□□□□ -0.48
USF1-209ENST00000529476 TTKP33981 857 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 SLC15A1P46059 708 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 SLC6A9P48067 706 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 TPTEP56180 551 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 PPP1CBP62140 327 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 GRB2P62993 217 aaKnown RBP12.05□□□□□ -0.48
USF1-209ENST00000529476 SPATA46Q5T0L3 261 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ZNF544Q6NX49 715 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ARL9Q6T311 187 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ZNF322Q6U7Q0 402 aaPredicted RBP12.05□□□□□ -0.48
USF1-209ENST00000529476 C20orf204Q6ZNR8 217 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 RHOUQ7L0Q8 258 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 KRT77Q7Z794 578 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 OR1J1Q8NGS3 322 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 OR2T27Q8NH04 317 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ASB17Q8WXJ9 295 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ZNF799Q96GE5 643 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 OR8B4Q96RC9 309 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 RHNO1Q9BSD3 238 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ANKRD60Q9BZ19 345 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 BCL2L14Q9BZR8 327 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 POFUT1Q9H488 388 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 ELOVL3Q9HB03 270 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 TBCCD1Q9NVR7 557 aa12.05□□□□□ -0.48
USF1-209ENST00000529476 EXOGQ9Y2C4 368 aaKnown RBP12.05□□□□□ -0.48
USF1-209ENST00000529476 C5orf63A6NC05 138 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 PHYHO14832 338 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 DANCRP0C864 163 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 SLC2A1P11166 492 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 MYF6P23409 242 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 HSD11B1P28845 292 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 SERPINF1P36955 418 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 CX3CR1P49238 355 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 RPS23P62266 143 aaKnown RBP12.04□□□□□ -0.48
USF1-209ENST00000529476 ROM1Q03395 351 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 ZNF85Q03923 595 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 RGS7BPQ6MZT1 257 aaPredicted RBP12.04□□□□□ -0.48
USF1-209ENST00000529476 KCTD18Q6PI47 426 aaPredicted RBP12.04□□□□□ -0.48
USF1-209ENST00000529476 DRAM2Q6UX65 266 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 COLCA1Q6ZS62 124 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.04□□□□□ -0.48
USF1-209ENST00000529476 FBXL14Q8N1E6 418 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 MUC15Q8N387 334 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 ZNF283Q8N7M2 679 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 OR52I1Q8NGK6 324 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 SLC25A40Q8TBP6 338 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 ZNF184Q99676 751 aaPredicted RBP12.04□□□□□ -0.48
USF1-209ENST00000529476 C1QTNF5Q9BXJ0 243 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 RASSF4Q9H2L5 321 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 MRPS18AQ9NVS2 196 aaKnown RBP12.04□□□□□ -0.48
USF1-209ENST00000529476 IKZF2Q9UKS7 526 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 RAB26Q9ULW5 256 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 LAMP3Q9UQV4 416 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 MYRFQ9Y2G1 1151 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 STARD10Q9Y365 291 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 CMAHPQ9Y471 501 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 LRP12Q9Y561 859 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 N6AMT1Q9Y5N5 214 aa12.04□□□□□ -0.48
USF1-209ENST00000529476 DAPL1A0PJW8 107 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 XPNPEP2O43895 674 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 CD8AP01732 235 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 LCATP04180 440 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 RGS6P49758 472 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 ACTC1P68032 377 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 ACTA1P68133 377 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 RAB40BQ12829 278 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 MST1LQ2TV78 715 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 KLHL22Q53GT1 634 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 UNQ6126/PRO20091Q6UXV3 157 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 LRP11Q86VZ4 500 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 ZNF679Q8IYX0 411 aa12.03□□□□□ -0.48
USF1-209ENST00000529476 IPCEF1Q8WWN9 437 aaPredicted RBP12.03□□□□□ -0.48
USF1-209ENST00000529476 MRPL24Q96A35 216 aaKnown RBP12.03□□□□□ -0.48
USF1-209ENST00000529476 APOBEC3DQ96AK3 386 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms