RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 L3HYPDHQ96EM0 354 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 PANX1Q96RD7 426 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 OR52D1Q9H346 318 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 VPS37BQ9H9H4 285 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 EDA2RQ9HAV5 297 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 ZDHHC4Q9NPG8 344 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 MED4Q9NPJ6 270 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 TRAV19A0A0A6YYK7 116 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 NCBP2LA6PVI3 153 aaKnown RBP2.51□□□□□ -2.01
SQLE-202ENST00000518604 COLCA2A8K830 154 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 H7C417 338 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 K7EMT4 169 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 L7N2F9 121 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 RRP8O43159 456 aaKnown RBP2.51□□□□□ -2.01
SQLE-202ENST00000518604 SLC22A5O76082 557 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 CCNE2O96020 404 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 HPRT1P00492 218 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 HBE1P02100 147 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 RBM34P42696 430 aaKnown RBP2.51□□□□□ -2.01
SQLE-202ENST00000518604 CDKN2DP55273 166 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 ZNF121P58317 390 aaPredicted RBP2.51□□□□□ -2.01
SQLE-202ENST00000518604 RPS23P62266 143 aaKnown RBP2.51□□□□□ -2.01
SQLE-202ENST00000518604 ZNF816Q0VGE8 651 aaPredicted RBP2.51□□□□□ -2.01
SQLE-202ENST00000518604 ART3Q13508 389 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 LY6EQ16553 131 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 PRSS8Q16651 343 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 ADNP2Q6IQ32 1131 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 FAM71AQ8IYT1 594 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 JAGN1Q8N5M9 183 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 PQLC3Q8N755 202 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 OR6N1Q8NGY5 312 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 OR10G6Q8NH81 332 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 LINC01560Q8TB33 94 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 RNF5Q99942 180 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 C11orf70Q9BRQ4 267 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 OSBPL11Q9BXB4 747 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 C1orf198Q9H425 327 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 AUNIPQ9H7T9 357 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 MRM3Q9HC36 420 aaKnown RBP2.51□□□□□ -2.01
SQLE-202ENST00000518604 RETNQ9HD89 108 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 CLN6Q9NWW5 311 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 MTFP1Q9UDX5 166 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 TNS2Q63HR2 1409 aa2.51□□□□□ -2.01
SQLE-202ENST00000518604 INSRP06213 1382 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 IGLV3-12A0A075B6K2 115 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 A0A1B0GW55 424 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 PDZK1P1A8MUH7 402 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 CHST10O43529 356 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 FOXH1O75593 365 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 CCNKO75909 580 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 CD160O95971 181 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 OR8U9P0C7N5 309 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 DUX4L2P0CJ85 424 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 DUX4L3P0CJ86 424 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 DUX4L5P0CJ88 424 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 DUX4L6P0CJ89 424 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 DUX4L7P0CJ90 424 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 IL1RNP18510 177 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 GALP22466 123 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 SLC11A1P49279 550 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 CRADDP78560 199 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 IL18Q14116 193 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 NCF4Q15080 339 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 MPV17L2Q567V2 206 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 ZFP1Q6P2D0 407 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 TMEM53Q6P2H8 277 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 WDFY1Q8IWB7 410 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 CCDC148Q8NFR7 591 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 OR9A2Q8NGT5 310 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 C17orf50Q8WW18 174 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 NRBF2Q96F24 287 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 BTN2A3PQ96KV6 586 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 ZNF488Q96MN9 340 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 COL21A1Q96P44 957 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 MTG1Q9BT17 334 aaPredicted RBP2.5□□□□□ -2.01
SQLE-202ENST00000518604 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 TMEM38AQ9H6F2 299 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 EXOSC4Q9NPD3 245 aaKnown RBP2.5□□□□□ -2.01
SQLE-202ENST00000518604 DUX4Q9UBX2 424 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 ENOPH1Q9UHY7 261 aa2.5□□□□□ -2.01
SQLE-202ENST00000518604 TSSC4Q9Y5U2 329 aaPredicted RBP2.5□□□□□ -2.01
SQLE-202ENST00000518604 GAKO14976 1311 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 A0A0J9YXV3 536 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 ZNF850A8MQ14 1090 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 H0YJW9 148 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 WRBO00258 174 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 CASQ2O14958 399 aaPredicted RBP2.49□□□□□ -2.01
SQLE-202ENST00000518604 CTRB1P17538 263 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 IL32P24001 234 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 CDC20Q12834 499 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 PIGHQ14442 188 aaPredicted RBP2.49□□□□□ -2.01
SQLE-202ENST00000518604 SNRNP35Q16560 246 aaKnown RBP2.49□□□□□ -2.01
SQLE-202ENST00000518604 BEX5Q5H9J7 111 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 SAXO2Q658L1 398 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 CBLN2Q8IUK8 224 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 CNPY4Q8N129 248 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 RBMXL1Q96E39 390 aaKnown RBP2.49□□□□□ -2.01
SQLE-202ENST00000518604 PRRC1Q96M27 445 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 TBL1YQ9BQ87 522 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 ZNF2Q9BSG1 426 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms