RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 TMEM182Q6ZP80 229 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 FGGYQ96C11 551 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 DUSP22Q9NRW4 184 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 TAS2R4Q9NYW5 299 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 PLEKHM1Q9Y4G2 1056 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 ATG2BQ96BY7 2078 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 A0A0U1RQK1 487 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 SERINC4A6NH21 518 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 SULT2B1O00204 365 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 YY2O15391 372 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 IGHA1P01876 353 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 BLVRBP30043 206 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 ARG2P78540 354 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 MALLQ13021 153 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 SLC36A2Q495M3 483 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 NHLRC3Q5JS37 347 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 MARCH1Q8TCQ1 289 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 RXFP4Q8TDU9 374 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 CPNE4Q96A23 557 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 SAT2Q96F10 170 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 RSRP1Q9BUV0 290 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 PATZ1Q9HBE1 687 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 P2RY10O00398 339 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 LILRB5O75023 590 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 BPNT1O95861 308 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 GP1BAP07359 652 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 PTGFRP43088 359 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 DCAF7P61962 342 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 RAB11AP62491 216 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 TOMM34Q15785 309 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 C4orf17Q53FE4 359 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 FCRL6Q6DN72 434 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 MRM1Q6IN84 353 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 LINC00469Q8N7U9 141 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 OR4D9Q8NGE8 314 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 OR2G2Q8NGZ5 317 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 C6orf106Q9H6K1 298 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 DHCR7Q9UBM7 475 aaKnown RBP10.22□□□□□ -0.77
TCOF1-211ENST00000513346 KCNS2Q9ULS6 477 aa10.22□□□□□ -0.77
TCOF1-211ENST00000513346 ST8SIA3O43173 380 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 B4GALNT1Q00973 533 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 INPP5JQ15735 1006 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 VWA2Q5GFL6 755 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 METRNLQ641Q3 311 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 SPRED2Q7Z698 418 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 ANGPTL5Q86XS5 388 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 SLC37A2Q8TED4 501 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 BORCS8Q96FH0 119 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 SUCNR1Q9BXA5 334 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 OR52A1Q9UKL2 312 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 LRRC37AA6NMS7 1700 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 SLC17A2O00624 439 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 FABP4P15090 132 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 POU3F2P20265 443 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 BCL6P41182 706 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 EEF1A2Q05639 463 aaKnown RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 HYAL1Q12794 435 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 ADIRFQ15847 76 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 EXOSC6Q5RKV6 272 aaKnown RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 CDX2Q99626 313 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 PAPOLGQ9BWT3 736 aaKnown RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 PRO1933Q9H354 126 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 CA10Q9NS85 328 aa10.21□□□□□ -0.77
TCOF1-211ENST00000513346 YBX2Q9Y2T7 364 aaKnown RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-211ENST00000513346 SBF2Q86WG5 1849 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 A8MXE2 369 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 NPIPB8E9PQR5 432 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 H0Y8X5 98 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 DOK2O60496 412 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF728P0DKX0 622 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 HRH1P35367 487 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 ZP2Q05996 745 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 HAGHQ16775 308 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 DMKNQ6E0U4 476 aaPredicted RBP10.21□□□□□ -0.78
TCOF1-211ENST00000513346 EXD3Q8N9H8 876 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 OR5AP2Q8NGF4 316 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 STACQ99469 402 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 IER2Q9BTL4 223 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF160Q9HCG1 818 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 WNT16Q9UBV4 365 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 KCNG2Q9UJ96 466 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 POMT1Q9Y6A1 747 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 FOCADQ5VW36 1801 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 CCDC163A0A0D9SF12 145 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 TLCD2A6NGC4 264 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 LY86O95711 162 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 CST4P01036 141 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 ALOX5APP20292 161 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 SRPXP78539 464 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 NCMAPQ5T1S8 102 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 LGI3Q8N145 548 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 ZDHHC22Q8N966 263 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 NUDCD2Q8WVJ2 157 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 NINJ1Q92982 152 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 MS4A6EQ96DS6 147 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 OR10A2Q9H208 303 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 WASF3Q9UPY6 502 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms