RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 J3QRE1 110 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 M0R135 149 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 WBP4O75554 376 aaKnown RBP14.99□□□□□ -0.01
ERCC3-207ENST00000490062 NGFP01138 241 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 APOC1P02654 83 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 OR2T7P0C7T2 308 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 FAM157BP0CG42 384 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 CCNOP22674 350 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 MTNR1AP48039 350 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 KCTD18Q6PI47 426 aaPredicted RBP14.99□□□□□ -0.01
ERCC3-207ENST00000490062 OR1J1Q8NGS3 322 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 OR2T27Q8NH04 317 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 ZNF799Q96GE5 643 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 DOK1Q99704 481 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 GSX2Q9BZM3 304 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 CXorf56Q9H5V9 222 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 LAMP5Q9UJQ1 280 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 LAMP3Q9UQV4 416 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 PLEKHA6Q9Y2H5 1048 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 KLHDC2Q9Y2U9 406 aa14.99□□□□□ -0.01
ERCC3-207ENST00000490062 CSMD2Q7Z408 3487 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 H7C417 338 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 ZNF254O75437 659 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 IGHV3-13P01766 116 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 PPP1CBP62140 327 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 DEFB113Q30KQ7 82 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 TMEM154Q6P9G4 183 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 FBXW12Q6X9E4 464 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 PRSS45Q7RTY3 260 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 EGFL6Q8IUX8 553 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 SLC35F2Q8IXU6 374 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 OR51G2Q8NGK0 314 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 CYGBQ8WWM9 190 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 OR8B4Q96RC9 309 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 COPS4Q9BT78 406 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 MRPL37Q9BZE1 423 aaKnown RBP14.98□□□□□ -0.01
ERCC3-207ENST00000490062 COPS3Q9UNS2 423 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 EXOGQ9Y2C4 368 aaKnown RBP14.98□□□□□ -0.01
ERCC3-207ENST00000490062 GRIP1Q9Y3R0 1128 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 PCDHGB1Q9Y5G3 927 aa14.98□□□□□ -0.01
ERCC3-207ENST00000490062 F5H5K5 113 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 LCKP06239 509 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 MRPL3P09001 348 aaKnown RBP14.97□□□□□ -0.01
ERCC3-207ENST00000490062 BMP4P12644 408 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 HSPA13P48723 471 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 PPOXP50336 477 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 AQP4P55087 323 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 ZNF91Q05481 1191 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 EGR3Q06889 387 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 ZNF718Q3SXZ3 478 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 VHLLQ6RSH7 139 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 ZNF679Q8IYX0 411 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 OR5L1Q8NGL2 311 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 ABHD4Q8TB40 342 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 SLC25A40Q8TBP6 338 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 KLF14Q8TD94 323 aaPredicted RBP14.97□□□□□ -0.01
ERCC3-207ENST00000490062 THEM6Q8WUY1 208 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 FOXC2Q99958 501 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 CXXC4Q9H2H0 198 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 CENPMQ9NSP4 180 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 STARD10Q9Y365 291 aa14.97□□□□□ -0.01
ERCC3-207ENST00000490062 USF3Q68DE3 2245 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 ACOD1A6NK06 481 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 CLIC3O95833 236 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 DBTP11182 482 aaKnown RBP14.96□□□□□ -0.01
ERCC3-207ENST00000490062 SELENOVP59797 346 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 ERVS71-1P61550 626 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 SNRPD2P62316 118 aaKnown RBP14.96□□□□□ -0.01
ERCC3-207ENST00000490062 ACTC1P68032 377 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 ACTA1P68133 377 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 IL5RAQ01344 420 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 MOGQ16653 247 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 ZNF684Q5T5D7 378 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 C8orf59Q8N0T1 100 aaPredicted RBP14.96□□□□□ -0.01
ERCC3-207ENST00000490062 SYNPRQ8TBG9 265 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 JAM3Q9BX67 310 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 OR2J1Q9GZK6 312 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 RASSF4Q9H2L5 321 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 SP140LQ9H930 580 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 SLCO1C1Q9NYB5 712 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 CGGBP1Q9UFW8 167 aaPredicted RBP14.96□□□□□ -0.01
ERCC3-207ENST00000490062 RPL36Q9Y3U8 105 aaKnown RBP14.96□□□□□ -0.01
ERCC3-207ENST00000490062 ARID1AO14497 2285 aa14.96□□□□□ -0.01
ERCC3-207ENST00000490062 PRR32B1ATL7 298 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 ZNF670-ZNF695F2Z2N8 137 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 GNAO1P09471 354 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 H2BFMP0C1H6 154 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 RAC2P15153 192 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 KITLGP21583 273 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 VHLP40337 213 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 HCCSP53701 268 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 KLF3P57682 345 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-207ENST00000490062 PSMA6P60900 246 aaKnown RBP14.95□□□□□ -0.02
ERCC3-207ENST00000490062 RAB40BQ12829 278 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 TAF13Q15543 124 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 ZNF322Q6U7Q0 402 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-207ENST00000490062 ITFG2Q969R8 447 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 SPSB4Q96A44 273 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 HAVCR1Q96D42 359 aa14.95□□□□□ -0.02
ERCC3-207ENST00000490062 RNFT2Q96EX2 444 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms