RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 FJX1Q86VR8 437 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZPLD1Q8TCW7 415 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF799Q96GE5 643 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 THOC3Q96J01 351 aaKnown RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 PAPOLGQ9BWT3 736 aaKnown RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ACKR4Q9NPB9 350 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 A6NLC8 198 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 OR7C1O76099 320 aaPredicted RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 EFNA3P52797 238 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ETFDHQ16134 617 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF684Q5T5D7 378 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 TRILQ7L0X0 811 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 IER2Q9BTL4 223 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF700Q9H0M5 742 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 LOXL2Q9Y4K0 774 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ANKRD30BLA7E2S9 258 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 DHHO43323 396 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 AKR7A2O43488 359 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 PMP2P02689 132 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 GUSBP08236 651 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 CEBPGP53567 150 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 IGLV3-21P80748 117 aaPredicted RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 EXOSC6Q5RKV6 272 aaKnown RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 C19orf48Q6RUI8 117 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 IQCF2Q8IXL9 164 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 MKXQ8IYA7 352 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 PCNPQ8WW12 178 aaKnown RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF501Q96CX3 271 aaPredicted RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 SLC17A5Q9NRA2 495 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 A0A1B0GTQ1 180 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 TMEM200CA6NKL6 621 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 OR4C45A6NMZ5 311 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 BGLAPP02818 100 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 NGFRP08138 427 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 HOXB5P09067 269 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 CDAP32320 146 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF121P58317 390 aaPredicted RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 BEX5Q5H9J7 111 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 FER1L6-AS2Q96M78 137 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 LANCL2Q9NS86 450 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 B3GNT2Q9NY97 397 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 DSCR4P56555 118 aaPredicted RBP10.59□□□□□ -0.71
TRA2B-214ENST00000487615 GUCA2AQ02747 115 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 PPA1Q15181 289 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 LPCAT3Q6P1A2 487 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 ANKRD16Q6P6B7 361 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 SEMA6DQ8NFY4 1073 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 NUDCD2Q8WVJ2 157 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 NINJ1Q92982 152 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 GPX7Q96SL4 187 aaPredicted RBP10.59□□□□□ -0.71
TRA2B-214ENST00000487615 TSNAXQ99598 290 aaKnown RBP10.59□□□□□ -0.71
TRA2B-214ENST00000487615 IGHV3-15A0A0B4J1V0 119 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 ALX3O95076 343 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 ASAH2BP0C7U1 165 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 RPS27AP62979 156 aaKnown RBP10.59□□□□□ -0.71
TRA2B-214ENST00000487615 UBA52P62987 128 aaKnown RBP10.59□□□□□ -0.71
TRA2B-214ENST00000487615 RFLNBQ8N5W9 214 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 FAM71CQ8NEG0 241 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 CALHM2Q9HA72 323 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 FANCFQ9NPI8 374 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 MTFP1Q9UDX5 166 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 LSM5Q9Y4Y9 91 aaKnown RBP10.59□□□□□ -0.71
TRA2B-214ENST00000487615 A0A1W2PR77 199 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 POM121CA8CG34 1229 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 CXCL13O43927 109 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 TPT1P13693 172 aaKnown RBP10.59□□□□□ -0.71
TRA2B-214ENST00000487615 LCN10Q6JVE6 187 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 NAXDQ8IW45 347 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 OR2I1PQ8NGU4 316 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 NICN1Q9BSH3 213 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF286AQ9HBT8 521 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 GLTPQ9NZD2 209 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 PCDHGA1Q9Y5H4 931 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 NOTCH4Q99466 2003 aa10.59□□□□□ -0.71
TRA2B-214ENST00000487615 PIGBOS1A0A0B4J2F0 54 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 MPZL1O95297 269 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 IGLV3-19P01714 112 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF585AQ6P3V2 769 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 GLS2Q9UI32 602 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 B3GALT1Q9Y5Z6 326 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ANKRD34BA5PLL1 514 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF814B7Z6K7 855 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF587BE7ETH6 402 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ABHD16AO95870 558 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 S100A6P06703 90 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
TRA2B-214ENST00000487615 OR2AK2Q8NG84 335 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 OR52H1Q8NGJ2 320 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 OR5L1Q8NGL2 311 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 GNRHR2Q96P88 292 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 UBL7Q96S82 380 aaPredicted RBP10.58□□□□□ -0.72
TRA2B-214ENST00000487615 GSX2Q9BZM3 304 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 OR51B6Q9H340 312 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 LRFN1Q9P244 771 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 KCNS2Q9ULS6 477 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 CTDSPLO15194 276 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 NDUFB6O95139 128 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 HRGP04196 525 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 SEC61A1P61619 476 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms