RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ASRGL1Q7L266 308 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 VASH1Q7L8A9 365 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-227ENST00000485102 KLBQ86Z14 1044 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 RNF148Q8N7C7 305 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 PLEKHA8Q96JA3 519 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 PRRC1Q96M27 445 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 CADM1Q9BY67 442 aaKnown RBP10.89□□□□□ -0.67
HDAC6-227ENST00000485102 A4GNTQ9UNA3 340 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 A0A1W2PPL8 197 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 OR6C6A6NF89 314 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 DOK2O60496 412 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 KRT36O76013 467 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 IFI30P13284 250 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 RHCEP18577 417 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 OR1E2P47887 323 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 HTR5AP47898 357 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 RGS6P49758 472 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 RPL15P61313 204 aaKnown RBP10.88□□□□□ -0.67
HDAC6-227ENST00000485102 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
HDAC6-227ENST00000485102 PRKCDQ05655 676 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 AQP6Q13520 282 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 C1orf146Q5VVC0 180 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 RNF113BQ8IZP6 322 aaKnown RBP10.88□□□□□ -0.67
HDAC6-227ENST00000485102 LINC00471Q8N535 108 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 TMEM86BQ8N661 226 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 OR8G5Q8NG78 346 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 CCDC124Q96CT7 223 aaKnown RBP10.88□□□□□ -0.67
HDAC6-227ENST00000485102 RASD2Q96D21 266 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 NEIL1Q96FI4 390 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-227ENST00000485102 HSH2DQ96JZ2 352 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 NOX4Q9NPH5 578 aa10.88□□□□□ -0.67
HDAC6-227ENST00000485102 SRRM5B3KS81 715 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 NDUFA7O95182 113 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 FABP3P05413 133 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 CD14P08571 375 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 RAP2AP10114 183 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 FCGR1AP12314 374 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 RPS2P15880 293 aaKnown RBP10.87□□□□□ -0.67
HDAC6-227ENST00000485102 RBMXP38159 391 aaKnown RBP10.87□□□□□ -0.67
HDAC6-227ENST00000485102 IFNGR2P38484 337 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 SRP9P49458 86 aaKnown RBP10.87□□□□□ -0.67
HDAC6-227ENST00000485102 GNB2P62879 340 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 ZNF404Q494X3 552 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 SPATC1Q76KD6 591 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 RRM2BQ7LG56 351 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 FAM122BQ7Z309 247 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 OAFQ86UD1 273 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 OR5L1Q8NGL2 311 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 OR4F5Q8NH21 305 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 OR51A7Q8NH64 312 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 MEGF10Q96KG7 1140 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 CITED1Q99966 193 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 SLC30A2Q9BRI3 323 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 TMEM246Q9BRR3 403 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 FNDC11Q9BVV2 318 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 NDEL1Q9GZM8 345 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 BEX1Q9HBH7 125 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 EMC7Q9NPA0 242 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 IL1RAPQ9NPH3 570 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 POMPQ9Y244 141 aa10.87□□□□□ -0.67
HDAC6-227ENST00000485102 SOX21Q9Y651 276 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-227ENST00000485102 TRAV27A0A087WT01 109 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 TRAV40A0A0B4J280 105 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 TEX13CA0A0J9YWL9 993 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 PRSS37A4D1T9 235 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 FAM181BA6NEQ2 426 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 LRRC30A6NM36 301 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 ACOT8O14734 319 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 PHYHO14832 338 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-227ENST00000485102 PIP5K1CO60331 668 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 GPANK1O95872 356 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 KNG1P01042 644 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 NCK1P16333 377 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 GATA4P43694 442 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 TRAM2Q15035 370 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 KCNMB1Q16558 191 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 DEFB112Q30KQ8 113 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 ZFP1Q6P2D0 407 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 Q6YL49 198 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 TMPRSS11FQ6ZWK6 438 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 NLRC3Q7RTR2 1065 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 IGFN1Q86VF2 1251 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 NRMQ8IXM6 262 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 OFCC1Q8IZS5 231 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 C1orf87Q8N0U7 546 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 CELF2-AS1Q8N7Q2 184 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 ATG16L2Q8NAA4 619 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 OR10S1Q8NGN2 331 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 OR1F12Q8NHA8 337 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 ERGIC1Q969X5 290 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 RSRC1Q96IZ7 334 aaKnown RBP10.86□□□□□ -0.67
HDAC6-227ENST00000485102 GRHPRQ9UBQ7 328 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 ENPP4Q9Y6X5 453 aa10.86□□□□□ -0.67
HDAC6-227ENST00000485102 DHRS12A0PJE2 317 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 IQCF6A8MYZ5 107 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 EFCAB9A8MZ26 197 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 CTLA4P16410 223 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms