RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 CRHBPP24387 322 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 HSD11B1P28845 292 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 MMP16P51512 607 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 RIDAP52758 137 aaKnown RBP13.26□□□□□ -0.29
CCM2-215ENST00000482714 RPS23P62266 143 aaKnown RBP13.26□□□□□ -0.29
CCM2-215ENST00000482714 SLC35A2P78381 396 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 NKX6-1P78426 367 aaPredicted RBP13.26□□□□□ -0.29
CCM2-215ENST00000482714 ZNF85Q03923 595 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 TLE4Q04727 773 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 CDONQ4KMG0 1287 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 MYPOPQ86VE0 399 aaPredicted RBP13.26□□□□□ -0.29
CCM2-215ENST00000482714 ZNF295-AS1Q8N0V1 137 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 STX19Q8N4C7 294 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 SMAP2Q8WU79 429 aaPredicted RBP13.26□□□□□ -0.29
CCM2-215ENST00000482714 APOBEC3DQ96AK3 386 aaPredicted RBP13.26□□□□□ -0.29
CCM2-215ENST00000482714 AMELYQ99218 206 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 C1QTNF5Q9BXJ0 243 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 ZNF442Q9H7R0 627 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 ERVK13-1Q9NX77 482 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 UBAP1Q9NZ09 502 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 KLHDC2Q9Y2U9 406 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 PCDHGB5Q9Y5G0 923 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 CYSRT1A8MQ03 144 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 SHISA9B4DS77 424 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 PTGES3LE9PB15 166 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 H3BSA7 217 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 M0R135 149 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 ABHD16AO95870 558 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 COL8A1P27658 744 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 CALCRP30988 508 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 HGFACQ04756 655 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 ZNF544Q6NX49 715 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 ZNF704Q6ZNC4 412 aaPredicted RBP13.25□□□□□ -0.29
CCM2-215ENST00000482714 OR52H1Q8NGJ2 320 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 ZNF799Q96GE5 643 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 ZNF649Q9BS31 505 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 SLCO1C1Q9NYB5 712 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 IKZF2Q9UKS7 526 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 CAB39Q9Y376 341 aaPredicted RBP13.25□□□□□ -0.29
CCM2-215ENST00000482714 GRIP1Q9Y3R0 1128 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 NOTCH2Q04721 2471 aa13.25□□□□□ -0.29
CCM2-215ENST00000482714 APOL3O95236 402 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 CDK1P06493 297 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 CCL2P13500 99 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 APOBEC3AP31941 199 aaPredicted RBP13.24□□□□□ -0.29
CCM2-215ENST00000482714 ZNF829Q3KNS6 432 aaPredicted RBP13.24□□□□□ -0.29
CCM2-215ENST00000482714 LRRN1Q6UXK5 716 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 TMPRSS11AQ6ZMR5 421 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 LHFPL3Q86UP9 236 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 ZNF786Q8N393 782 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 ZNF283Q8N7M2 679 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 TBX5Q99593 518 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 CDCA4Q9BXL8 241 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 CISD1Q9NZ45 108 aaKnown RBP13.24□□□□□ -0.29
CCM2-215ENST00000482714 MRM2Q9UI43 246 aaKnown RBP13.24□□□□□ -0.29
CCM2-215ENST00000482714 FBXO9Q9UK97 447 aaPredicted RBP13.24□□□□□ -0.29
CCM2-215ENST00000482714 POU2F3Q9UKI9 436 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 LRCH1Q9Y2L9 728 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 LRP12Q9Y561 859 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 ATP23Q9Y6H3 246 aa13.24□□□□□ -0.29
CCM2-215ENST00000482714 TMEM269A0A1B0GVZ9 245 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 ATP6V1G2-DDX39BF2Z307 99 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 LCATP04180 440 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 RPSAP08865 295 aaKnown RBP13.23□□□□□ -0.29
CCM2-215ENST00000482714 DBHP09172 617 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 LIMS3P0CW19 117 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 LIMS4P0CW20 117 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 EVX1P49640 407 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 PRKXP51817 358 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 GABARAPL2P60520 117 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 MOGQ16653 247 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 ZNF672Q499Z4 452 aaPredicted RBP13.23□□□□□ -0.29
CCM2-215ENST00000482714 FAM220AQ7Z4H9 259 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 PAQR4Q8N4S7 273 aaPredicted RBP13.23□□□□□ -0.29
CCM2-215ENST00000482714 SLC7A6Q92536 515 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 DOK1Q99704 481 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 DHRS9Q9BPW9 319 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 ALG8Q9BVK2 526 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
CCM2-215ENST00000482714 RGCCQ9H4X1 137 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 MOB1AQ9H8S9 216 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 ZNF391Q9UJN7 358 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 EDARQ9UNE0 448 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 ERGIC3Q9Y282 383 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 TMEM129A0AVI4 362 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 SMPD2O60906 423 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 CFL1P23528 166 aaKnown RBP13.23□□□□□ -0.29
CCM2-215ENST00000482714 WNT5AP41221 380 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 SELENOVP59797 346 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 PSMA6P60900 246 aaKnown RBP13.23□□□□□ -0.29
CCM2-215ENST00000482714 MALLQ13021 153 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 ZNF718Q3SXZ3 478 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 LIPNQ5VXI9 398 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 FDX2Q6P4F2 183 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 AHSA2Q719I0 299 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 SPATC1Q76KD6 591 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 SSX6Q7RTT6 188 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 PRSS45Q7RTY3 260 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms