RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 A0A1W2PPV9 198 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 A0A1W2PR48 441 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 RNF212BA8MTL3 300 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 C17orf100A8MU93 164 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 K7EN84 100 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 FAAHO00519 579 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 PLPP3O14495 311 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ACOT8O14734 319 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 SNAP91O60641 907 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ANXA9O76027 345 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 VENTXO95231 258 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 BMP15O95972 392 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 HPRP00739 348 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 DUX4L4P0CJ87 422 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF43P17038 809 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ADORA2AP29274 412 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 SSTR4P31391 388 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 HSD17B3P37058 310 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 HTR5AP47898 357 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 FUT6P51993 359 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM50BP56557 158 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 RAB25P57735 213 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 STXBP1P61764 594 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 TLE3Q04726 772 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CDK5R2Q13319 367 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CEACAM7Q14002 265 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZIC1Q15915 447 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 MS4A18Q3C1V0 323 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF648Q5T619 568 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 PWWP2BQ6NUJ5 590 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 UBE3DQ7Z6J8 389 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CPNE9Q8IYJ1 553 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF808Q8N4W9 903 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ACBD7Q8N6N7 88 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 OR5AU1Q8NGC0 362 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 OR4D9Q8NGE8 314 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 OR52I1Q8NGK6 324 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM171Q8WVE6 324 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 UCN3Q969E3 161 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 PYURFQ96I23 114 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 COL21A1Q96P44 957 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CPXM1Q96SM3 734 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 RIOK2Q9BVS4 552 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 POMKQ9H5K3 350 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 AKTIPQ9H8T0 292 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 DNAJC4Q9NNZ3 241 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ISYNA1Q9NPH2 558 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 IL17RBQ9NRM6 502 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 DUS2Q9NX74 493 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CALML5Q9NZT1 146 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 GNG12Q9UBI6 72 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CD84Q9UIB8 345 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZFP30Q9Y2G7 519 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 POLDIP2Q9Y2S7 368 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 GREB1Q4ZG55 1949 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CACNA1IQ9P0X4 2223 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 AHCTF1Q8WYP5 2266 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 PCSK5Q92824 1860 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 MEGF11A6BM72 1044 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 C2CD4BA6NLJ0 364 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF878C9JN71 531 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 J3QLI3 93 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ENTPD6O75354 484 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 PRKCGP05129 697 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CT62P0C5K7 136 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 GP9P14770 177 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 PRPH2P23942 346 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 RBMXP38159 391 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 AGTR2P50052 363 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CDH12P55289 794 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 BIDP55957 195 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CLDN12P56749 244 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 NCALDP61601 193 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZXDBP98169 803 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 RGS1Q08116 209 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 OR1Q1Q15612 314 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ZSWIM7Q19AV6 140 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CARD16Q5EG05 197 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CD300LDQ6UXZ3 194 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 PRSS45Q7RTY3 260 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 GOLGA7Q7Z5G4 137 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 GALNT10Q86SR1 603 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 C8orf59Q8N0T1 100 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM217Q8N7C4 229 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 POC1AQ8NBT0 407 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 OR10V1Q8NGI7 309 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 OR13C4Q8NGS5 318 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 LYPD6BQ8NI32 183 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 TBCKQ8TEA7 893 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 DNASE2BQ8WZ79 361 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 RPUSD4Q96CM3 377 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 FAM46AQ96IP4 442 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 ITCHQ96J02 903 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 CXorf58Q96LI9 332 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 SGK494Q96LW2 274 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 FANCD2OSQ96PS1 177 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 DDOQ99489 341 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 NAA50Q9GZZ1 169 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 DSN1Q9H410 356 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 GSTO2Q9H4Y5 243 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms