RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 KITLGP21583 273 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 ACHEP22303 614 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 MAGEB1P43366 347 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 ESRRGP62508 458 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 GGTLC2Q14390 218 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 FBXW12Q6X9E4 464 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 ZDHHC13Q8IUH4 622 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 ZNF511Q8NB15 262 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 OR5L1Q8NGL2 311 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 OR6K6Q8NGW6 343 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 LRTOMTQ8WZ04 291 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 GTF3AQ92664 365 aaKnown RBP14.77□□□□□ -0.05
USP39-208ENST00000455732 HAVCR1Q96D42 359 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 TEX12Q9BXU0 123 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 MARCH7Q9H992 704 aa14.77□□□□□ -0.05
USP39-208ENST00000455732 ZSCAN5BA6NJL1 495 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 A8MV72 311 aaPredicted RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 KIAA1324LA8MWY0 1029 aaPredicted RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 PRR23D1E9PI22 279 aaPredicted RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 PRODHO43272 600 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 RP2O75695 350 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 IGHV1-46P01743 117 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 PRR23D2P0DMB1 279 aaPredicted RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 RAC2P15153 192 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 ZNF23P17027 643 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 OTX1P32242 354 aaPredicted RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 RPS27P42677 84 aaKnown RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 CRISP1P54107 249 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 KDM4DQ6B0I6 523 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 AMIGO2Q86SJ2 522 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 CENPNQ96H22 339 aaPredicted RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 DIRC2Q96SL1 478 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 MED20Q9H944 212 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 PURGQ9UJV8 347 aaKnown RBP14.76□□□□□ -0.05
USP39-208ENST00000455732 ZDHHC8Q9ULC8 765 aa14.76□□□□□ -0.05
USP39-208ENST00000455732 F5H5K5 113 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 LYNX1G3V0Z9 82 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 ZNF593O00488 134 aaPredicted RBP14.75□□□□□ -0.05
USP39-208ENST00000455732 TIMM8AO60220 97 aaPredicted RBP14.75□□□□□ -0.05
USP39-208ENST00000455732 CD55P08174 381 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 SPARCP09486 303 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 TACSTD2P09758 323 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 LYNX1P0DP58 116 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 GSTT1P30711 240 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 CCL8P80075 99 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 CYB5R2Q6BCY4 276 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 PLBD1Q6P4A8 553 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 DCXRQ7Z4W1 244 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 ST7LQ8TDW4 575 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 YIPF5Q969M3 257 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 SPTSSAQ969W0 71 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 CMBLQ96DG6 245 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 INTS14Q96SY0 518 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 KRT84Q9NSB2 600 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 ENOPH1Q9UHY7 261 aa14.75□□□□□ -0.05
USP39-208ENST00000455732 M0R135 149 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 LILRA1O75019 489 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 COL8A2P25067 703 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 CRYBB2P43320 205 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 GZMKP49863 264 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 TPTEP56180 551 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 TMEM33P57088 247 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 CDK5R2Q13319 367 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 KPNB1Q14974 876 aaKnown RBP14.74□□□□□ -0.05
USP39-208ENST00000455732 SLC35D3Q5M8T2 416 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 TMEM236Q5W0B7 351 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 ZFP1Q6P2D0 407 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 TIGD4Q8IY51 512 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 SLAMF6Q96DU3 332 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 ZNF799Q96GE5 643 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 PLEKHA8Q96JA3 519 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 OSBPL10Q9BXB5 764 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 PRRG3Q9BZD7 231 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 OR51V1Q9H2C8 321 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 SAP30LQ9HAJ7 183 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 DECR2Q9NUI1 292 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 CUBNO60494 3623 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 FBN3Q75N90 2809 aa14.74□□□□□ -0.05
USP39-208ENST00000455732 MXRA5Q9NR99 2828 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 ZNF878C9JN71 531 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 SPRY3O43610 288 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 ZNF16P17020 682 aaPredicted RBP14.73□□□□□ -0.05
USP39-208ENST00000455732 SLC2A5P22732 501 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 CHN2P52757 468 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 PTGES3Q15185 160 aaKnown RBP14.73□□□□□ -0.05
USP39-208ENST00000455732 SNAPC1Q16533 368 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 DRAM2Q6UX65 266 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 RHOUQ7L0Q8 258 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 SHFQ7M4L6 423 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 ERI1Q8IV48 349 aaKnown RBP14.73□□□□□ -0.05
USP39-208ENST00000455732 CPOQ8IVL8 374 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 OR6N2Q8NGY6 317 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 PYDC1Q8WXC3 89 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 OTULINQ96BN8 352 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 ELMOD3Q96FG2 381 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 MDFIQ99750 246 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 COPS4Q9BT78 406 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 ZNF275Q9NSD4 429 aaPredicted RBP14.73□□□□□ -0.05
USP39-208ENST00000455732 TMEM160Q9NX00 188 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 PTTG3PQ9NZH4 202 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms