RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SLC35A2P78381 396 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 EGFEM1PQ0D2K5 195 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 TRIM25Q14258 630 aaKnown RBP10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 LCN8Q6JVE9 175 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 PGM2L1Q6PCE3 622 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 Q6ZR03 302 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 PXKQ7Z7A4 578 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 LRRC18Q8N456 261 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 OR52P1PQ8NH57 321 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 NFKBIDQ8NI38 313 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 ZNF420Q8TAQ5 688 aaPredicted RBP10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 NPRL2Q8WTW4 380 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 LZICQ8WZA0 190 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 SLC41A3Q96GZ6 507 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 RCC1LQ96I51 464 aaKnown RBP10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 CLPTM1LQ96KA5 538 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 KCNN2Q9H2S1 579 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 GORASP2Q9H8Y8 452 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 PALMDQ9NP74 551 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 BAG5Q9UL15 447 aa10.34□□□□□ -0.75
AC004540.1-204ENST00000449537 LOC100509620A0A075B734 347 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 CXCR6O00574 342 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 HOXD3P31249 432 aaPredicted RBP10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 ARHGDIAP52565 204 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 ARF6P62330 175 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 PUDPQ08623 228 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 DHRS4L2Q6PKH6 230 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 ZNF836Q6ZNA1 936 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 DCDC5Q6ZRR9 648 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 RFPL4BQ6ZWI9 263 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 ARMC8Q8IUR7 673 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 C10orf111Q8N326 155 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 CLIP4Q8N3C7 705 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 SCAIQ8N9R8 606 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 MAL2Q969L2 176 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 UTP4Q969X6 686 aaKnown RBP10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 CCDC124Q96CT7 223 aaKnown RBP10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 LRGUKQ96M69 825 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 NSMCE2Q96MF7 247 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 TECTBQ96PL2 329 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 ASPNQ9BXN1 380 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 SEMA6AQ9H2E6 1030 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 ELOVL3Q9HB03 270 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 SLC13A4Q9UKG4 626 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 ZNF232Q9UNY5 417 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 STAB2Q8WWQ8 2551 aa10.33□□□□□ -0.76
AC004540.1-204ENST00000449537 AQP12BA6NM10 295 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 LRRC30A6NM36 301 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 ARPC2O15144 300 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 FKBP6O75344 327 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 PAHP00439 452 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 QDPRP09417 244 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 NUDT7P0C024 238 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 FLOT2Q14254 428 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 MAPK11Q15759 364 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 FAM201AQ5SY85 155 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 DHFR2Q86XF0 187 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 AQP12AQ8IXF9 295 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 C1orf87Q8N0U7 546 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 ATG16L2Q8NAA4 619 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 OR6X1Q8NH79 312 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 SLC26A7Q8TE54 656 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 FAM162AQ96A26 154 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 MAP6Q96JE9 813 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 RANBP3Q9H6Z4 567 aaPredicted RBP10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 CCNB1IP1Q9NPC3 277 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 ERVK-18Q9QC07 812 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 RPS6KB2Q9UBS0 482 aa10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 ZNF443Q9Y2A4 671 aaPredicted RBP10.32□□□□□ -0.76
AC004540.1-204ENST00000449537 PLPP3O14495 311 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 FAHP16930 419 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 GSTM3P21266 225 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 EEF1B2P24534 225 aaKnown RBP10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 KDELR2P33947 212 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 PSMB10P40306 273 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 KPNB1Q14974 876 aaKnown RBP10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 TAF11Q15544 211 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 LRRC23Q53EV4 343 aaPredicted RBP10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 ZFP1Q6P2D0 407 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 CBLL1Q75N03 491 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 SDR9C7Q8NEX9 313 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 OR6S1Q8NH40 331 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 DPF1Q92782 380 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 ZNF566Q969W8 418 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 RSRC1Q96IZ7 334 aaKnown RBP10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 C4orf45Q96LM5 186 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 POLR2J2Q9GZM3 115 aaKnown RBP10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 POLR2J3Q9H1A7 115 aaKnown RBP10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 DCLRE1BQ9H816 532 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 C12orf10Q9HB07 376 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 MRPL39Q9NYK5 338 aaKnown RBP10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 MAB21L2Q9Y586 359 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 DNAH1Q9P2D7 4330 aa10.31□□□□□ -0.76
AC004540.1-204ENST00000449537 ANGPTL7O43827 346 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 FMO6PO60774 539 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 C1QCP02747 245 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 OPN1SWP03999 348 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 UMPSP11172 480 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms