RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 RNF167Q9H6Y7 350 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 SLCO2B1O94956 709 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 PIGPP57054 158 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF154Q13106 437 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 PRR27Q6MZM9 219 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 OR5AS1Q8N127 324 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 SPNS1Q9H2V7 528 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 PRKRAO75569 313 aaKnown RBP12.76□□□□□ -0.37
COL4A3-202ENST00000396578 AKR7A3O95154 331 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 C11orf91Q3C1V1 193 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 TMEM268Q5VZI3 342 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 TIMD4Q96H15 378 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 CDCA4Q9BXL8 241 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 TWSG1Q9GZX9 223 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 USP3Q9Y6I4 520 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 GPX2P18283 190 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 PCSK6P29122 969 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 SDHAP31040 664 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 AGFG1P52594 562 aaKnown RBP12.76□□□□□ -0.37
COL4A3-202ENST00000396578 NKAIN2Q5VXU1 208 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 SLC17A4Q9Y2C5 497 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 PFN3P60673 137 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF573Q86YE8 665 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 SMIM19Q96E16 107 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 ASH2LQ9UBL3 628 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 TIAM2Q8IVF5 1701 aa12.76□□□□□ -0.37
COL4A3-202ENST00000396578 RGRP47804 291 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 SSBP1Q04837 148 aaKnown RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 LIPNQ5VXI9 398 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 ARRDC2Q8TBH0 407 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 A0A087WV62 115 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 A0A0B4J203 849 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TLCD2A6NGC4 264 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 G3V3Y1 287 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 PHOX2AO14813 284 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF865P0CJ78 1059 aaPredicted RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 SLC25A4P12235 298 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 HIST1H1CP16403 213 aaKnown RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 PXNP49023 591 aaPredicted RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TMEM183BQ1AE95 376 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 Q6ZSR9 355 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 MED18Q9BUE0 208 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 DICER1Q9UPY3 1922 aaKnown RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 HSPB2A8KAH6 182 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 COX7A2P2O60397 106 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 IAPPP10997 89 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 CYB561P49447 251 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 HSPB2Q16082 182 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 LYG2Q86SG7 212 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 C11orf40Q8WZ69 217 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 ERGIC1Q969X5 290 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TAAR6Q96RI8 345 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 SLC46A2Q9BY10 475 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 HS3ST2Q9Y278 367 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TRAPPC1Q9Y5R8 145 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 OR2M5A3KFT3 312 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 B4GALT3O60512 393 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 CTNSO60931 367 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 WDR1O75083 606 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 CYC1P08574 325 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 NID1P14543 1247 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 DHODHQ02127 395 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 SAXO2Q658L1 398 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 FA2HQ7L5A8 372 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 PRR14Q9BWN1 585 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 GABARAPL3Q9BY60 117 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TIMM9Q9Y5J7 89 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 SPTBP11277 2137 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TEX50A0A1B0GTY4 177 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 GPR37O15354 613 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 AQP8O94778 261 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 CA3P07451 260 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 FBP1P09467 338 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 ISL1P61371 349 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 OR2AK2Q8NG84 335 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TEX37Q96LM6 180 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 HDAC8Q9BY41 377 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 ANKRD31Q8N7Z5 1873 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 GP2P55259 537 aaKnown RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 TMEM81Q6P7N7 255 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 HLA-CQ95604 372 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 C2orf50Q96LR7 162 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 S1PR3Q99500 378 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 LRP6O75581 1613 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 BCL2L11O43521 198 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 PINX1Q96BK5 328 aaKnown RBP12.75□□□□□ -0.37
COL4A3-202ENST00000396578 GABARAPL1Q9H0R8 117 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 IFT22Q9H7X7 185 aa12.75□□□□□ -0.37
COL4A3-202ENST00000396578 EIF4E2O60573 245 aaKnown RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 NRASP01111 189 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF17P17021 662 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZP3P21754 424 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF687Q8N1G0 1237 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 FAM26EQ8N5C1 309 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF296Q8WUU4 475 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 PPP1R1CQ8WVI7 109 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZNFX1Q9P2E3 1918 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms