RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 OR51V1Q9H2C8 321 aa20.77■□□□□ 0.92
SDF2L1-201ENST00000248958 MED20Q9H944 212 aa20.77■□□□□ 0.92
SDF2L1-201ENST00000248958 CHODLQ9H9P2 273 aa20.77■□□□□ 0.92
SDF2L1-201ENST00000248958 DECR2Q9NUI1 292 aa20.77■□□□□ 0.92
SDF2L1-201ENST00000248958 PURGQ9UJV8 347 aaKnown RBP20.77■□□□□ 0.92
SDF2L1-201ENST00000248958 F5H5K5 113 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 ADH4P08319 380 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 MAGEB1P43366 347 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 RIN1Q13671 783 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 SNAPC1Q16533 368 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 LYPD4Q6UWN0 246 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 FBXW12Q6X9E4 464 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 PYDC1Q8WXC3 89 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 BPESC1Q9GZL8 116 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 TVP23BQ9NYZ1 205 aa20.76■□□□□ 0.91
SDF2L1-201ENST00000248958 M0R135 149 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 RPS27P42677 84 aaKnown RBP20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 TMEM33P57088 247 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 TMEM255AQ5JRV8 349 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 TMEM236Q5W0B7 351 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 RHOUQ7L0Q8 258 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 CPOQ8IVL8 374 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 OR10S1Q8NGN2 331 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 OR6N2Q8NGY6 317 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 ZNF799Q96GE5 643 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 EGLN1Q9GZT9 426 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 SEMA6AQ9H2E6 1030 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 POFUT1Q9H488 388 aa20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 YLPM1P49750 1951 aaKnown RBP20.75■□□□□ 0.91
SDF2L1-201ENST00000248958 ZNF878C9JN71 531 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 TPD52L2O43399 206 aaKnown RBP20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 CD5LO43866 347 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 NCR1O76036 304 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 IGHV1-46P01743 117 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 SLC15A1P46059 708 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 CCL8P80075 99 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 GGTLC2Q14390 218 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 TAF13Q15543 124 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 TMEM249Q2WGJ8 235 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 KLHL12Q53G59 568 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 DRAM2Q6UX65 266 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 CXXC5Q7LFL8 322 aaKnown RBP20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 ERI1Q8IV48 349 aaKnown RBP20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 SLAMF6Q96DU3 332 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 KCNJ15Q99712 375 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 SAP30LQ9HAJ7 183 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 PTTG3PQ9NZH4 202 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 OAZ3Q9UMX2 235 aa20.74■□□□□ 0.91
SDF2L1-201ENST00000248958 SPRY3O43610 288 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 TLX2O43763 284 aaPredicted RBP20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 LCATP04180 440 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 CD55P08174 381 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 SELEP16581 610 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 IGFBP5P24593 272 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 COL8A2P25067 703 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 OTX1P32242 354 aaPredicted RBP20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 CRYBB2P43320 205 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 GRB2P62993 217 aaKnown RBP20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 MALLQ13021 153 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 EIF2B1Q14232 305 aaKnown RBP20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 TSTQ16762 297 aaKnown RBP20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 Q71RC1 249 aaPredicted RBP20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 TIGD4Q8IY51 512 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 ST7LQ8TDW4 575 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 COPS4Q9BT78 406 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 TOR3AQ9H497 397 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 CENPMQ9NSP4 180 aa20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.73■□□□□ 0.91
SDF2L1-201ENST00000248958 IGHV1-69-2A0A0G2JMI3 117 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 ZSCAN5BA6NJL1 495 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 LYNX1G3V0Z9 82 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 MITFO75030 526 aaPredicted RBP20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 APOC1P02654 83 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 TACSTD2P09758 323 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 LYNX1P0DP58 116 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 PSKH1P11801 424 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 TNFSF4P23510 183 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 GPR6P46095 362 aaPredicted RBP20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 CHN2P52757 468 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 KRTAP1-1Q07627 177 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 CDK5R2Q13319 367 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 SLX4IPQ5VYV7 408 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 DPY19L4Q7Z388 723 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 ZNF454Q8N9F8 522 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 GTF3AQ92664 365 aaKnown RBP20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 ELMOD3Q96FG2 381 aa20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 RBM4BQ9BQ04 359 aaKnown RBP20.72■□□□□ 0.91
SDF2L1-201ENST00000248958 ZAR1LA6NP61 321 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 SLC2A5P22732 501 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 SLC6A9P48067 706 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 GZMKP49863 264 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 RPS7P62081 194 aaKnown RBP20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 PPP2R2BQ00005 443 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 LCN1P1Q5VSP4 162 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 YIPF5Q969M3 257 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 ZMYND19Q96E35 227 aaPredicted RBP20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 SP140LQ9H930 580 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 MSL2Q9HCI7 577 aa20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 ZNF275Q9NSD4 429 aaPredicted RBP20.71■□□□□ 0.91
SDF2L1-201ENST00000248958 TMEFF2Q9UIK5 374 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms