RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ZBTB25P24278 435 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 TACR3P29371 465 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 C1orf100Q5SVJ3 147 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 TMEM164Q5U3C3 297 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 ASPHD2Q6ICH7 369 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 BCORP1Q8N888 145 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 OR1J4Q8NGS1 313 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 TSPAN32Q96QS1 320 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 LPAR4Q99677 370 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 PRRT1Q99946 306 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 DDA1Q9BW61 102 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 ASCL3Q9NQ33 180 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 GRHPRQ9UBQ7 328 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 H7C2Y5 167 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 NUPL2O15504 423 aaKnown RBP18.37■□□□□ 0.53
SNX3-201ENST00000230085 SCRG1O75711 98 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 CD34P28906 385 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 ARHGAP40Q5TG30 622 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 DHRS7BQ6IAN0 325 aaPredicted RBP18.37■□□□□ 0.53
SNX3-201ENST00000230085 ZNF679Q8IYX0 411 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 SLC38A9Q8NBW4 561 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 OR51A4Q8NGJ6 313 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 OR13C8Q8NGS7 320 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 MITD1Q8WV92 249 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 NUDT16L1Q9BRJ7 211 aaKnown RBP18.37■□□□□ 0.53
SNX3-201ENST00000230085 MPDZO75970 2070 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 OR14I1A6ND48 311 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 CDRT15L2A8MXV6 281 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 EIF1AYO14602 144 aaKnown RBP18.36■□□□□ 0.53
SNX3-201ENST00000230085 ACHEP22303 614 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 EIF1AXP47813 144 aaKnown RBP18.36■□□□□ 0.53
SNX3-201ENST00000230085 EGR4Q05215 589 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 RPL18Q07020 188 aaKnown RBP18.36■□□□□ 0.53
SNX3-201ENST00000230085 SKP2Q13309 424 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 YOD1Q5VVQ6 348 aaPredicted RBP18.36■□□□□ 0.53
SNX3-201ENST00000230085 TMEM225Q6GV28 225 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 LYG2Q86SG7 212 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 ADGRE4PQ86SQ3 457 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 LYPD6Q86Y78 171 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 MOGAT1Q96PD6 335 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 TSSK2Q96PF2 358 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 VRK1Q99986 396 aaPredicted RBP18.36■□□□□ 0.53
SNX3-201ENST00000230085 ZPBPQ9BS86 351 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 ULBP3Q9BZM4 244 aa18.36■□□□□ 0.53
SNX3-201ENST00000230085 SDK2Q58EX2 2172 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 ZNF98A6NK75 572 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 SULT2B1O00204 365 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 GNB5O14775 395 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 DXOO77932 396 aaKnown RBP18.35■□□□□ 0.53
SNX3-201ENST00000230085 CYB5AP00167 134 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 HEXAP06865 529 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 TBPP20226 339 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 HTR2CP28335 458 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 LUMP51884 338 aaPredicted RBP18.35■□□□□ 0.53
SNX3-201ENST00000230085 SKP1P63208 163 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 PRTGQ2VWP7 1150 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 GXYLT1Q4G148 440 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 RAB12Q6IQ22 244 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 IGF2-ASQ6U949 168 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 DPY19L4Q7Z388 723 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 OR6N2Q8NGY6 317 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 OR4C3Q8NH37 302 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 ATG5Q9H1Y0 275 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 TMEM185BQ9H7F4 350 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 AHCTF1Q8WYP5 2266 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 FITM1A5D6W6 292 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 FAM171A2A8MVW0 826 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 ZNF736B4DX44 427 aaPredicted RBP18.35■□□□□ 0.53
SNX3-201ENST00000230085 DISC1C4P0D8 188 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 BLOC1S5-TXNDC5H3BN57 136 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 RAD1O60671 282 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 AMY2AP04746 511 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 CD2P06729 351 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 CASRP41180 1078 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 PPICP45877 212 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 DEFA5Q01523 94 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 SERTAD2Q14140 314 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 GRM7Q14831 915 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 C3orf33Q6P1S2 294 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 GALNT16Q8N428 558 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 SLC30A7Q8NEW0 376 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 TSEN15Q8WW01 171 aaKnown RBP18.35■□□□□ 0.53
SNX3-201ENST00000230085 ADAM19Q9H013 955 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 DHCR7Q9UBM7 475 aaKnown RBP18.35■□□□□ 0.53
SNX3-201ENST00000230085 CKLFQ9UBR5 152 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 DTX4Q9Y2E6 619 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 CLDN16Q9Y5I7 305 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 ZFHX4Q86UP3 3567 aa18.35■□□□□ 0.53
SNX3-201ENST00000230085 A0A1B0GTH9 108 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 STK17BO94768 372 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 FCER2P06734 321 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 CD79AP11912 226 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 RNH1P13489 461 aaKnown RBP18.34■□□□□ 0.53
SNX3-201ENST00000230085 BIKQ13323 160 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 INPP5JQ15735 1006 aaPredicted RBP18.34■□□□□ 0.53
SNX3-201ENST00000230085 TMEM185AQ8NFB2 350 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 OR1J2Q8NGS2 313 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 AQP3Q92482 292 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 ZBTB8AQ96BR9 441 aa18.34■□□□□ 0.53
SNX3-201ENST00000230085 SLC7A5P2Q9GIP4 190 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms