RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RFPL4BQ6ZWI9 263 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 SHFQ7M4L6 423 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 DPY19L4Q7Z388 723 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 C1orf174Q8IYL3 243 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 SYNPRQ8TBG9 265 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 DCLRE1CQ96SD1 692 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 TOR3AQ9H497 397 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 MARCH7Q9H992 704 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 DYNLRB1Q9NP97 96 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 IMPAD1Q9NX62 359 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 DUSP13Q9UII6 198 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 FBXO9Q9UK97 447 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 MTORP42345 2549 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 A0A1W2PPW3 197 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 SELENOFO60613 162 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 NAA10P41227 235 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 EIF2B1Q14232 305 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 TAF13Q15543 124 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 ZNF718Q3SXZ3 478 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 SPATA46Q5T0L3 261 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 NXNL2Q5VZ03 156 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 TIGD4Q8IY51 512 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 FAM81AQ8TBF8 368 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 SLC25A40Q8TBP6 338 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 PNRC2Q9NPJ4 139 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 CENPMQ9NSP4 180 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 TBCCD1Q9NVR7 557 aa16.9■□□□□ 0.3
SHKBP1-214ENST00000597396 SETD2Q9BYW2 2564 aaPredicted RBP16.89■□□□□ 0.3
SHKBP1-214ENST00000597396 TMEM129A0AVI4 362 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 F5H5K5 113 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 H7C417 338 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 ICMTO60725 284 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 NGFP01138 241 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 GCH1P30793 250 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 EVX1P49640 407 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 RGS6P49758 472 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 KLF3P57682 345 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 LRRC36Q1X8D7 754 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 Q5PR19 223 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 SHEQ5VZ18 495 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 BCDIN3DQ7Z5W3 292 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 LRP11Q86VZ4 500 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 GID4Q8IVV7 300 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 OR10S1Q8NGN2 331 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 OR8J1Q8NGP2 316 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 IPCEF1Q8WWN9 437 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 SPTSSAQ969W0 71 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 SLAMF6Q96DU3 332 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 HRASLS5Q96KN8 279 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 MBOAT4Q96T53 435 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 TEAD3Q99594 435 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 DOK1Q99704 481 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 VRK1Q99986 396 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 COPS4Q9BT78 406 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 OR2J1Q9GZK6 312 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 DCLRE1BQ9H816 532 aa16.89■□□□□ 0.29
SHKBP1-214ENST00000597396 CCDC182A6NF36 153 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 SLC22A31A6NKX4 558 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF878C9JN71 531 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 M0R233 179 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF250P15622 560 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 PPOXP50336 477 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 TPTEP56180 551 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 EFNB1P98172 346 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 LPCAT4Q643R3 524 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 SPATC1Q76KD6 591 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 MEPCEQ7L2J0 689 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 GALNT4Q8N4A0 578 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 ST7LQ8TDW4 575 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 COG8Q96MW5 612 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 BARX1Q9HBU1 254 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 GMPPBQ9Y5P6 360 aa16.88■□□□□ 0.29
SHKBP1-214ENST00000597396 H0YHG0 523 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 NDUFS7O75251 213 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 CLPTM1O96005 669 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 MRPL3P09001 348 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 PEX2P28328 305 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 NKPD1Q17RQ9 610 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 AADACL4Q5VUY2 407 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 SLC16A9Q7RTY1 509 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF454Q8N9F8 522 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 OR5L1Q8NGL2 311 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 OTOSQ8NHW6 89 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 THEM6Q8WUY1 208 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 APOBEC3DQ96AK3 386 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 MARS2Q96GW9 593 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 ABHD6Q9BV23 337 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 C8orf4Q9NR00 106 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 DDX28Q9NUL7 540 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 SLCO1C1Q9NYB5 712 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 TAAR3PQ9P1P4 343 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 MYEF2Q9P2K5 600 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 GPR160Q9UJ42 338 aa16.87■□□□□ 0.29
SHKBP1-214ENST00000597396 IGLV3-9A0A075B6K5 115 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 H3BSA7 217 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 J3QW42 95 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 M0R135 149 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 IGHV4-39P01824 125 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 LYNP07948 512 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 ERCC1P07992 297 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms